Gene : Sobic.002G128200 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR22870:SF209 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MJK13 Genomic Order:  1302
Name:  ? Sobic.002G128200 Secondary Identifier:  ? PAC:37951436
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G128200 0.5kb upstream 0.5kb upstream 5015 true Chr02: 17706704-17711718 Sorghum bicolor
Sobic.002G128200 0.5kb upstream 0.5kb upstream 500 false Chr02: 17706704-17707203 Sorghum bicolor
Sobic.002G128200 0.5kb downstream 0.5kb downstream 5015 true Chr02: 17707204-17712218 Sorghum bicolor
Sobic.002G128200 0.5kb downstream 0.5kb downstream 500 false Chr02: 17711719-17712218 Sorghum bicolor
Sobic.002G128200 1.0kb upstream 1.0kb upstream 5515 true Chr02: 17706204-17711718 Sorghum bicolor
Sobic.002G128200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 17706204-17707203 Sorghum bicolor
Sobic.002G128200 1.0kb downstream 1.0kb downstream 5515 true Chr02: 17707204-17712718 Sorghum bicolor
Sobic.002G128200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 17711719-17712718 Sorghum bicolor
Sobic.002G128200 2.0kb upstream 2.0kb upstream 6515 true Chr02: 17705204-17711718 Sorghum bicolor
Sobic.002G128200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 17705204-17707203 Sorghum bicolor
Sobic.002G128200 2.0kb downstream 2.0kb downstream 6515 true Chr02: 17707204-17713718 Sorghum bicolor
Sobic.002G128200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 17711719-17713718 Sorghum bicolor
Sobic.002G128200 5.0kb upstream 5.0kb upstream 9515 true Chr02: 17702204-17711718 Sorghum bicolor
Sobic.002G128200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 17702204-17707203 Sorghum bicolor
Sobic.002G128200 5.0kb downstream 5.0kb downstream 9515 true Chr02: 17707204-17716718 Sorghum bicolor
Sobic.002G128200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 17711719-17716718 Sorghum bicolor
Sobic.002G128200 10.0kb upstream 10.0kb upstream 14515 true Chr02: 17697204-17711718 Sorghum bicolor
Sobic.002G128200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 17697204-17707203 Sorghum bicolor
Sobic.002G128200 10.0kb downstream 10.0kb downstream 14515 true Chr02: 17707204-17721718 Sorghum bicolor
Sobic.002G128200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 17711719-17721718 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041443 5273 Angiosperm View MSA
122177088 5267 Panicoideae View MSA
124589794 5269 Grass View MSA
121345963 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.308       Low
cufflinks 57.654     High High
cufflinks 21.827     High  
cufflinks 14.56     High  
cufflinks 11.031        
cufflinks 19.737     High  
cufflinks 22.554     High  
cufflinks 29.396     High High
cufflinks 15.093     High  
cufflinks 16.858     High  
cufflinks 15.715     High  
cufflinks 19.073     High  
cufflinks 20.417     High  
cufflinks 16.873     High  
cufflinks 16.059     High  
cufflinks 28.989     High High
cufflinks 17.531     High  
cufflinks 20.947     High  
cufflinks 21.399     High  
cufflinks 18.763     High  
cufflinks 8.381       Low
cufflinks 13.335     High  
cufflinks 15.419     High  
cufflinks 14.689     High  
cufflinks 52.774     High High
cufflinks 59.857     High High
cufflinks 13.211     High  
cufflinks 2.089       Low
cufflinks 16.216     High  
cufflinks 14.061     High  

0 Strain