Gene : Sobic.002G131000 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11353//PTHR11353:SF99 - CHAPERONIN // CHAPERONIN 60 SUBUNIT ALPHA 2, CHLOROPLASTIC Genomic Order:  1330
Name:  ? Sobic.002G131000 Secondary Identifier:  ? PAC:37953110
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G131000 0.5kb upstream 0.5kb upstream 5282 true Chr02: 18574253-18579534 Sorghum bicolor
Sobic.002G131000 0.5kb upstream 0.5kb upstream 500 false Chr02: 18574253-18574752 Sorghum bicolor
Sobic.002G131000 0.5kb downstream 0.5kb downstream 5282 true Chr02: 18574753-18580034 Sorghum bicolor
Sobic.002G131000 0.5kb downstream 0.5kb downstream 500 false Chr02: 18579535-18580034 Sorghum bicolor
Sobic.002G131000 1.0kb upstream 1.0kb upstream 5782 true Chr02: 18573753-18579534 Sorghum bicolor
Sobic.002G131000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 18573753-18574752 Sorghum bicolor
Sobic.002G131000 1.0kb downstream 1.0kb downstream 5782 true Chr02: 18574753-18580534 Sorghum bicolor
Sobic.002G131000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 18579535-18580534 Sorghum bicolor
Sobic.002G131000 2.0kb upstream 2.0kb upstream 6782 true Chr02: 18572753-18579534 Sorghum bicolor
Sobic.002G131000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 18572753-18574752 Sorghum bicolor
Sobic.002G131000 2.0kb downstream 2.0kb downstream 6782 true Chr02: 18574753-18581534 Sorghum bicolor
Sobic.002G131000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 18579535-18581534 Sorghum bicolor
Sobic.002G131000 5.0kb upstream 5.0kb upstream 9782 true Chr02: 18569753-18579534 Sorghum bicolor
Sobic.002G131000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 18569753-18574752 Sorghum bicolor
Sobic.002G131000 5.0kb downstream 5.0kb downstream 9782 true Chr02: 18574753-18584534 Sorghum bicolor
Sobic.002G131000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 18579535-18584534 Sorghum bicolor
Sobic.002G131000 10.0kb upstream 10.0kb upstream 14782 true Chr02: 18564753-18579534 Sorghum bicolor
Sobic.002G131000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 18564753-18574752 Sorghum bicolor
Sobic.002G131000 10.0kb downstream 10.0kb downstream 14782 true Chr02: 18574753-18589534 Sorghum bicolor
Sobic.002G131000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 18579535-18589534 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185659 5267 Panicoideae View MSA
124589408 5269 Grass View MSA
122048196 5273 Angiosperm View MSA
121346372 5274 Embryophyte View MSA
123427883 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.668        
cufflinks 0.059       Low
cufflinks 0.155       Low
cufflinks 1.339        
cufflinks 1.411        
cufflinks 1.052        
cufflinks 1.894        
cufflinks 0.292        
cufflinks 1.979        
cufflinks 2.2        
cufflinks 1.163        
cufflinks 1.562        
cufflinks 1.112        
cufflinks 1.303        
cufflinks 0.736        
cufflinks 0.175       Low
cufflinks 1.825        
cufflinks 2.252        
cufflinks 0.089     Low Low
cufflinks 1.22        
cufflinks 6.7       High
cufflinks 1.254        
cufflinks 1.605        
cufflinks 1.743        
cufflinks 0.053       Low
cufflinks 0.045       Low
cufflinks 1.516        
cufflinks 0.907        
cufflinks 3.956       High
cufflinks 2.054        

0 Strain