Gene : Sobic.002G126300 S. bicolor v3.1.1
Genomic Order:  1285 Name:  ? Sobic.002G126300
Secondary Identifier:  ? PAC:37954771
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G126300 0.5kb upstream 0.5kb upstream 5455 true Chr02: 17206479-17211933 Sorghum bicolor
Sobic.002G126300 0.5kb upstream 0.5kb upstream 500 false Chr02: 17211434-17211933 Sorghum bicolor
Sobic.002G126300 0.5kb downstream 0.5kb downstream 5455 true Chr02: 17205979-17211433 Sorghum bicolor
Sobic.002G126300 0.5kb downstream 0.5kb downstream 500 false Chr02: 17205979-17206478 Sorghum bicolor
Sobic.002G126300 1.0kb upstream 1.0kb upstream 5955 true Chr02: 17206479-17212433 Sorghum bicolor
Sobic.002G126300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 17211434-17212433 Sorghum bicolor
Sobic.002G126300 1.0kb downstream 1.0kb downstream 5955 true Chr02: 17205479-17211433 Sorghum bicolor
Sobic.002G126300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 17205479-17206478 Sorghum bicolor
Sobic.002G126300 2.0kb upstream 2.0kb upstream 6955 true Chr02: 17206479-17213433 Sorghum bicolor
Sobic.002G126300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 17211434-17213433 Sorghum bicolor
Sobic.002G126300 2.0kb downstream 2.0kb downstream 6955 true Chr02: 17204479-17211433 Sorghum bicolor
Sobic.002G126300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 17204479-17206478 Sorghum bicolor
Sobic.002G126300 5.0kb upstream 5.0kb upstream 9955 true Chr02: 17206479-17216433 Sorghum bicolor
Sobic.002G126300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 17211434-17216433 Sorghum bicolor
Sobic.002G126300 5.0kb downstream 5.0kb downstream 9955 true Chr02: 17201479-17211433 Sorghum bicolor
Sobic.002G126300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 17201479-17206478 Sorghum bicolor
Sobic.002G126300 10.0kb upstream 10.0kb upstream 14955 true Chr02: 17206479-17221433 Sorghum bicolor
Sobic.002G126300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 17211434-17221433 Sorghum bicolor
Sobic.002G126300 10.0kb downstream 10.0kb downstream 14955 true Chr02: 17196479-17211433 Sorghum bicolor
Sobic.002G126300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 17196479-17206478 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122143047 5267 Panicoideae Singleton cluster - no MSA
124584826 5269 Grass View MSA
122046829 5273 Angiosperm View MSA
121348564 5274 Embryophyte View MSA
123380915 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.628        
cufflinks 0.746       Low
cufflinks 2.508        
cufflinks 2.989        
cufflinks 4.135       High
cufflinks 2.508        
cufflinks 1.69        
cufflinks 1.051       Low
cufflinks 3.546       High
cufflinks 3.168        
cufflinks 1.952        
cufflinks 2.07        
cufflinks 2.611        
cufflinks 1.549        
cufflinks 2.676        
cufflinks 1.718        
cufflinks 1.617        
cufflinks 1.534        
cufflinks 1.659        
cufflinks 2.175        
cufflinks 6.949       High
cufflinks 1.766        
cufflinks 1.736        
cufflinks 1.839        
cufflinks 1.318        
cufflinks 0.776       Low
cufflinks 2.508        
cufflinks 3.056        
cufflinks 1.314        
cufflinks 2.727        

0 Strain