Gene : Sobic.002G124900 S. bicolor v3.1.1
Defline:  (1 of 2) K02138 - F-type H+-transporting ATPase subunit d (ATPeF0D, ATP5H, ATP7) Genomic Order:  1271
Name:  ? Sobic.002G124900 Secondary Identifier:  ? PAC:37955390
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G124900 0.5kb upstream 0.5kb upstream 3102 true Chr02: 16877717-16880818 Sorghum bicolor
Sobic.002G124900 0.5kb upstream 0.5kb upstream 500 false Chr02: 16877717-16878216 Sorghum bicolor
Sobic.002G124900 0.5kb downstream 0.5kb downstream 3102 true Chr02: 16878217-16881318 Sorghum bicolor
Sobic.002G124900 0.5kb downstream 0.5kb downstream 500 false Chr02: 16880819-16881318 Sorghum bicolor
Sobic.002G124900 1.0kb upstream 1.0kb upstream 3602 true Chr02: 16877217-16880818 Sorghum bicolor
Sobic.002G124900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 16877217-16878216 Sorghum bicolor
Sobic.002G124900 1.0kb downstream 1.0kb downstream 3602 true Chr02: 16878217-16881818 Sorghum bicolor
Sobic.002G124900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 16880819-16881818 Sorghum bicolor
Sobic.002G124900 2.0kb upstream 2.0kb upstream 4602 true Chr02: 16876217-16880818 Sorghum bicolor
Sobic.002G124900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 16876217-16878216 Sorghum bicolor
Sobic.002G124900 2.0kb downstream 2.0kb downstream 4602 true Chr02: 16878217-16882818 Sorghum bicolor
Sobic.002G124900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 16880819-16882818 Sorghum bicolor
Sobic.002G124900 5.0kb upstream 5.0kb upstream 7602 true Chr02: 16873217-16880818 Sorghum bicolor
Sobic.002G124900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 16873217-16878216 Sorghum bicolor
Sobic.002G124900 5.0kb downstream 5.0kb downstream 7602 true Chr02: 16878217-16885818 Sorghum bicolor
Sobic.002G124900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 16880819-16885818 Sorghum bicolor
Sobic.002G124900 10.0kb upstream 10.0kb upstream 12602 true Chr02: 16868217-16880818 Sorghum bicolor
Sobic.002G124900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 16868217-16878216 Sorghum bicolor
Sobic.002G124900 10.0kb downstream 10.0kb downstream 12602 true Chr02: 16878217-16890818 Sorghum bicolor
Sobic.002G124900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 16880819-16890818 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177459 5267 Panicoideae View MSA
124585577 5269 Grass View MSA
122044674 5273 Angiosperm View MSA
121348780 5274 Embryophyte View MSA
123427707 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.367     High  
cufflinks 3.448       Low
cufflinks 2.137       Low
cufflinks 1.883       Low
cufflinks 8.872        
cufflinks 4.533        
cufflinks 8.482        
cufflinks 6.823        
cufflinks 4.162        
cufflinks 5.31        
cufflinks 18.458     High High
cufflinks 12.848     High  
cufflinks 4.354        
cufflinks 19.666     High High
cufflinks 12.703     High  
cufflinks 2.174       Low
cufflinks 9.427        
cufflinks 9.804        
cufflinks 2.992       Low
cufflinks 7.222        
cufflinks 10.022        
cufflinks 29.074     High High
cufflinks 21.66     High High
cufflinks 22.404     High High
cufflinks 1.193       Low
cufflinks 4.277        
cufflinks 8.119        
cufflinks 5.554        
cufflinks 10.212        
cufflinks 12.229     High  

0 Strain