Gene : Sobic.002G119500 S. bicolor v3.1.1
Defline:  (1 of 1) K02693 - photosystem I subunit IV (psaE) Genomic Order:  1215
Name:  ? Sobic.002G119500 Secondary Identifier:  ? PAC:37950999
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G119500 0.5kb upstream 0.5kb upstream 1577 true Chr02: 14975163-14976739 Sorghum bicolor
Sobic.002G119500 0.5kb upstream 0.5kb upstream 500 false Chr02: 14975163-14975662 Sorghum bicolor
Sobic.002G119500 0.5kb downstream 0.5kb downstream 1577 true Chr02: 14975663-14977239 Sorghum bicolor
Sobic.002G119500 0.5kb downstream 0.5kb downstream 500 false Chr02: 14976740-14977239 Sorghum bicolor
Sobic.002G119500 1.0kb upstream 1.0kb upstream 2077 true Chr02: 14974663-14976739 Sorghum bicolor
Sobic.002G119500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 14974663-14975662 Sorghum bicolor
Sobic.002G119500 1.0kb downstream 1.0kb downstream 2077 true Chr02: 14975663-14977739 Sorghum bicolor
Sobic.002G119500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 14976740-14977739 Sorghum bicolor
Sobic.002G119500 2.0kb upstream 2.0kb upstream 3077 true Chr02: 14973663-14976739 Sorghum bicolor
Sobic.002G119500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 14973663-14975662 Sorghum bicolor
Sobic.002G119500 2.0kb downstream 2.0kb downstream 3077 true Chr02: 14975663-14978739 Sorghum bicolor
Sobic.002G119500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 14976740-14978739 Sorghum bicolor
Sobic.002G119500 5.0kb upstream 5.0kb upstream 6077 true Chr02: 14970663-14976739 Sorghum bicolor
Sobic.002G119500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 14970663-14975662 Sorghum bicolor
Sobic.002G119500 5.0kb downstream 5.0kb downstream 6077 true Chr02: 14975663-14981739 Sorghum bicolor
Sobic.002G119500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 14976740-14981739 Sorghum bicolor
Sobic.002G119500 10.0kb upstream 10.0kb upstream 11077 true Chr02: 14965663-14976739 Sorghum bicolor
Sobic.002G119500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 14965663-14975662 Sorghum bicolor
Sobic.002G119500 10.0kb downstream 10.0kb downstream 11077 true Chr02: 14975663-14986739 Sorghum bicolor
Sobic.002G119500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 14976740-14986739 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188988 5267 Panicoideae View MSA
124588959 5269 Grass View MSA
122047877 5273 Angiosperm View MSA
121348572 5274 Embryophyte View MSA
123426677 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.028        
cufflinks 687.621     High High
cufflinks 113.056     High  
cufflinks 88.273     High  
cufflinks 5.676        
cufflinks 98.912     High  
cufflinks 196.862     High High
cufflinks 721.585     High High
cufflinks 7.326        
cufflinks 5.511        
cufflinks 0.617       Low
cufflinks 0.27       Low
cufflinks 9.316        
cufflinks 0.368       Low
cufflinks 34.647     High  
cufflinks 405.282     High High
cufflinks 220.893     High High
cufflinks 193.382     High  
cufflinks 213.728     High High
cufflinks 98.788     High  
cufflinks 2.489        
cufflinks 0.268       Low
cufflinks 0.266       Low
cufflinks 0.688       Low
cufflinks 237.734     High High
cufflinks 732.578     High High
cufflinks 0.179       Low
cufflinks 0.259       Low
cufflinks 280.09     High High
cufflinks 17.642     High  

0 Strain