Gene : Sobic.002G117200 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR14499:SF11 - PROTEIN VM106R.1 Genomic Order:  1192
Name:  ? Sobic.002G117200 Secondary Identifier:  ? PAC:37950545
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G117200 0.5kb upstream 0.5kb upstream 3547 true Chr02: 14480179-14483725 Sorghum bicolor
Sobic.002G117200 0.5kb upstream 0.5kb upstream 500 false Chr02: 14480179-14480678 Sorghum bicolor
Sobic.002G117200 0.5kb downstream 0.5kb downstream 3547 true Chr02: 14480679-14484225 Sorghum bicolor
Sobic.002G117200 0.5kb downstream 0.5kb downstream 500 false Chr02: 14483726-14484225 Sorghum bicolor
Sobic.002G117200 1.0kb upstream 1.0kb upstream 4047 true Chr02: 14479679-14483725 Sorghum bicolor
Sobic.002G117200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 14479679-14480678 Sorghum bicolor
Sobic.002G117200 1.0kb downstream 1.0kb downstream 4047 true Chr02: 14480679-14484725 Sorghum bicolor
Sobic.002G117200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 14483726-14484725 Sorghum bicolor
Sobic.002G117200 2.0kb upstream 2.0kb upstream 5047 true Chr02: 14478679-14483725 Sorghum bicolor
Sobic.002G117200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 14478679-14480678 Sorghum bicolor
Sobic.002G117200 2.0kb downstream 2.0kb downstream 5047 true Chr02: 14480679-14485725 Sorghum bicolor
Sobic.002G117200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 14483726-14485725 Sorghum bicolor
Sobic.002G117200 5.0kb upstream 5.0kb upstream 8047 true Chr02: 14475679-14483725 Sorghum bicolor
Sobic.002G117200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 14475679-14480678 Sorghum bicolor
Sobic.002G117200 5.0kb downstream 5.0kb downstream 8047 true Chr02: 14480679-14488725 Sorghum bicolor
Sobic.002G117200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 14483726-14488725 Sorghum bicolor
Sobic.002G117200 10.0kb upstream 10.0kb upstream 13047 true Chr02: 14470679-14483725 Sorghum bicolor
Sobic.002G117200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 14470679-14480678 Sorghum bicolor
Sobic.002G117200 10.0kb downstream 10.0kb downstream 13047 true Chr02: 14480679-14493725 Sorghum bicolor
Sobic.002G117200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 14483726-14493725 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179133 5267 Panicoideae View MSA
124579559 5269 Grass View MSA
122042173 5273 Angiosperm View MSA
121348328 5274 Embryophyte View MSA
123380822 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.039       High
cufflinks 0.457       Low
cufflinks 0.737       Low
cufflinks 1.106        
cufflinks 0.823        
cufflinks 1.701        
cufflinks 0.942        
cufflinks 0.729       Low
cufflinks 1.64        
cufflinks 1.483        
cufflinks 2.032       High
cufflinks 2.4       High
cufflinks 0.767        
cufflinks 3.025       High
cufflinks 0.804        
cufflinks 1.01        
cufflinks 0.884        
cufflinks 1.042        
cufflinks 2.198       High
cufflinks 1.122        
cufflinks 2.502       High
cufflinks 1.929        
cufflinks 2.141       High
cufflinks 2.101       High
cufflinks 0.881        
cufflinks 0.371       Low
cufflinks 1.4        
cufflinks 1.703        
cufflinks 0.995        
cufflinks 1.051        

0 Strain