Gene : Sobic.002G116900 S. bicolor v3.1.1
Defline:  similar to Putative uncharacterized protein P0025D09.105-1 Genomic Order:  1189
Name:  ? Sobic.002G116900 Secondary Identifier:  ? PAC:37954587
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G116900 0.5kb upstream 0.5kb upstream 4552 true Chr02: 14463850-14468401 Sorghum bicolor
Sobic.002G116900 0.5kb upstream 0.5kb upstream 500 false Chr02: 14467902-14468401 Sorghum bicolor
Sobic.002G116900 0.5kb downstream 0.5kb downstream 4552 true Chr02: 14463350-14467901 Sorghum bicolor
Sobic.002G116900 0.5kb downstream 0.5kb downstream 500 false Chr02: 14463350-14463849 Sorghum bicolor
Sobic.002G116900 1.0kb upstream 1.0kb upstream 5052 true Chr02: 14463850-14468901 Sorghum bicolor
Sobic.002G116900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 14467902-14468901 Sorghum bicolor
Sobic.002G116900 1.0kb downstream 1.0kb downstream 5052 true Chr02: 14462850-14467901 Sorghum bicolor
Sobic.002G116900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 14462850-14463849 Sorghum bicolor
Sobic.002G116900 2.0kb upstream 2.0kb upstream 6052 true Chr02: 14463850-14469901 Sorghum bicolor
Sobic.002G116900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 14467902-14469901 Sorghum bicolor
Sobic.002G116900 2.0kb downstream 2.0kb downstream 6052 true Chr02: 14461850-14467901 Sorghum bicolor
Sobic.002G116900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 14461850-14463849 Sorghum bicolor
Sobic.002G116900 5.0kb upstream 5.0kb upstream 9052 true Chr02: 14463850-14472901 Sorghum bicolor
Sobic.002G116900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 14467902-14472901 Sorghum bicolor
Sobic.002G116900 5.0kb downstream 5.0kb downstream 9052 true Chr02: 14458850-14467901 Sorghum bicolor
Sobic.002G116900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 14458850-14463849 Sorghum bicolor
Sobic.002G116900 10.0kb upstream 10.0kb upstream 14052 true Chr02: 14463850-14477901 Sorghum bicolor
Sobic.002G116900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 14467902-14477901 Sorghum bicolor
Sobic.002G116900 10.0kb downstream 10.0kb downstream 14052 true Chr02: 14453850-14467901 Sorghum bicolor
Sobic.002G116900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 14453850-14463849 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178553 5267 Panicoideae View MSA
124585677 5269 Grass View MSA
122042611 5273 Angiosperm View MSA
123429170 5275 Viridiplantae View MSA
121346689 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.162       Low
cufflinks 6.924     High  
cufflinks 10.883     High  
cufflinks 13.826     High High
cufflinks 4.552       Low
cufflinks 9.236        
cufflinks 11.178       High
cufflinks 10.78     High  
cufflinks 8.771        
cufflinks 8.076        
cufflinks 8.666        
cufflinks 10.79        
cufflinks 7.593        
cufflinks 8.6        
cufflinks 6.41        
cufflinks 10.526     High  
cufflinks 11.631     High High
cufflinks 12.904     High High
cufflinks 4.834       Low
cufflinks 11.184       High
cufflinks 5.955        
cufflinks 8.031        
cufflinks 9.753        
cufflinks 8.597        
cufflinks 7.606        
cufflinks 8.302     High  
cufflinks 9.375        
cufflinks 3.131       Low
cufflinks 15.211     High High
cufflinks 7.794        

0 Strain