Gene : Sobic.006G078600 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR12197//PTHR12197:SF178 - SET AND MYND DOMAIN CONTAINING // SUBFAMILY NOT NAMED Genomic Order:  817
Name:  ? Sobic.006G078600 Secondary Identifier:  ? PAC:37949464
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G078600 0.5kb upstream 0.5kb upstream 5802 true Chr06: 44430182-44435983 Sorghum bicolor
Sobic.006G078600 0.5kb upstream 0.5kb upstream 500 false Chr06: 44435484-44435983 Sorghum bicolor
Sobic.006G078600 0.5kb downstream 0.5kb downstream 5802 true Chr06: 44429682-44435483 Sorghum bicolor
Sobic.006G078600 0.5kb downstream 0.5kb downstream 500 false Chr06: 44429682-44430181 Sorghum bicolor
Sobic.006G078600 1.0kb upstream 1.0kb upstream 6302 true Chr06: 44430182-44436483 Sorghum bicolor
Sobic.006G078600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 44435484-44436483 Sorghum bicolor
Sobic.006G078600 1.0kb downstream 1.0kb downstream 6302 true Chr06: 44429182-44435483 Sorghum bicolor
Sobic.006G078600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 44429182-44430181 Sorghum bicolor
Sobic.006G078600 2.0kb upstream 2.0kb upstream 7302 true Chr06: 44430182-44437483 Sorghum bicolor
Sobic.006G078600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 44435484-44437483 Sorghum bicolor
Sobic.006G078600 2.0kb downstream 2.0kb downstream 7302 true Chr06: 44428182-44435483 Sorghum bicolor
Sobic.006G078600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 44428182-44430181 Sorghum bicolor
Sobic.006G078600 5.0kb upstream 5.0kb upstream 10302 true Chr06: 44430182-44440483 Sorghum bicolor
Sobic.006G078600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 44435484-44440483 Sorghum bicolor
Sobic.006G078600 5.0kb downstream 5.0kb downstream 10302 true Chr06: 44425182-44435483 Sorghum bicolor
Sobic.006G078600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 44425182-44430181 Sorghum bicolor
Sobic.006G078600 10.0kb upstream 10.0kb upstream 15302 true Chr06: 44430182-44445483 Sorghum bicolor
Sobic.006G078600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 44435484-44445483 Sorghum bicolor
Sobic.006G078600 10.0kb downstream 10.0kb downstream 15302 true Chr06: 44420182-44435483 Sorghum bicolor
Sobic.006G078600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 44420182-44430181 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183612 5267 Panicoideae View MSA
124580826 5269 Grass View MSA
122044425 5273 Angiosperm View MSA
121310294 5274 Embryophyte View MSA
123428850 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.459        
cufflinks 0.266       Low
cufflinks 0.358        
cufflinks 0.423        
cufflinks 0.405        
cufflinks 0.504        
cufflinks 0.327       Low
cufflinks 0.502        
cufflinks 0.686       High
cufflinks 0.561        
cufflinks 0.598        
cufflinks 0.575        
cufflinks 0.384        
cufflinks 0.588        
cufflinks 0.496        
cufflinks 0.351        
cufflinks 0.358        
cufflinks 0.327       Low
cufflinks 0.42        
cufflinks 0.356        
cufflinks 1.059       High
cufflinks 0.53        
cufflinks 0.507        
cufflinks 0.525        
cufflinks 0.28       Low
cufflinks 0.272       Low
cufflinks 0.514        
cufflinks 0.298       Low
cufflinks 0.483        
cufflinks 0.65       High

0 Strain