Gene : Sobic.002G112600 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR23111//PTHR23111:SF29 - ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1141
Name:  ? Sobic.002G112600 Secondary Identifier:  ? PAC:37949696
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G112600 0.5kb upstream 0.5kb upstream 7591 true Chr02: 13721445-13729035 Sorghum bicolor
Sobic.002G112600 0.5kb upstream 0.5kb upstream 500 false Chr02: 13728536-13729035 Sorghum bicolor
Sobic.002G112600 0.5kb downstream 0.5kb downstream 7591 true Chr02: 13720945-13728535 Sorghum bicolor
Sobic.002G112600 0.5kb downstream 0.5kb downstream 500 false Chr02: 13720945-13721444 Sorghum bicolor
Sobic.002G112600 1.0kb upstream 1.0kb upstream 8091 true Chr02: 13721445-13729535 Sorghum bicolor
Sobic.002G112600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 13728536-13729535 Sorghum bicolor
Sobic.002G112600 1.0kb downstream 1.0kb downstream 8091 true Chr02: 13720445-13728535 Sorghum bicolor
Sobic.002G112600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 13720445-13721444 Sorghum bicolor
Sobic.002G112600 2.0kb upstream 2.0kb upstream 9091 true Chr02: 13721445-13730535 Sorghum bicolor
Sobic.002G112600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 13728536-13730535 Sorghum bicolor
Sobic.002G112600 2.0kb downstream 2.0kb downstream 9091 true Chr02: 13719445-13728535 Sorghum bicolor
Sobic.002G112600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 13719445-13721444 Sorghum bicolor
Sobic.002G112600 5.0kb upstream 5.0kb upstream 12091 true Chr02: 13721445-13733535 Sorghum bicolor
Sobic.002G112600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 13728536-13733535 Sorghum bicolor
Sobic.002G112600 5.0kb downstream 5.0kb downstream 12091 true Chr02: 13716445-13728535 Sorghum bicolor
Sobic.002G112600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 13716445-13721444 Sorghum bicolor
Sobic.002G112600 10.0kb upstream 10.0kb upstream 17091 true Chr02: 13721445-13738535 Sorghum bicolor
Sobic.002G112600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 13728536-13738535 Sorghum bicolor
Sobic.002G112600 10.0kb downstream 10.0kb downstream 17091 true Chr02: 13711445-13728535 Sorghum bicolor
Sobic.002G112600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 13711445-13721444 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177145 5267 Panicoideae View MSA
124578146 5269 Grass View MSA
122043265 5273 Angiosperm View MSA
121349230 5274 Embryophyte View MSA
123427278 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.058       High
cufflinks 0.132       Low
cufflinks 0.388       Low
cufflinks 1.097        
cufflinks 2.28        
cufflinks 0.98        
cufflinks 0.995        
cufflinks 0.222       Low
cufflinks 2.543       High
cufflinks 2.52       High
cufflinks 1.173        
cufflinks 1.264        
cufflinks 1.125        
cufflinks 1.076        
cufflinks 1.261        
cufflinks 0.413       Low
cufflinks 1.04        
cufflinks 1.026        
cufflinks 0.663        
cufflinks 1.06        
cufflinks 3.775       High
cufflinks 1.377        
cufflinks 1.306        
cufflinks 1.298        
cufflinks 0.26       Low
cufflinks 0.123       Low
cufflinks 1.206        
cufflinks 3.043       High
cufflinks 0.878        
cufflinks 1.871        

0 Strain