Gene : Sobic.006G079900 S. bicolor v3.1.1
Defline:  (1 of 1) K12181 - COP9 signalosome complex subunit 8 (COPS8, CSN8) Genomic Order:  829
Name:  ? Sobic.006G079900 Secondary Identifier:  ? PAC:37948640
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G079900 0.5kb upstream 0.5kb upstream 3804 true Chr06: 44828343-44832146 Sorghum bicolor
Sobic.006G079900 0.5kb upstream 0.5kb upstream 500 false Chr06: 44831647-44832146 Sorghum bicolor
Sobic.006G079900 0.5kb downstream 0.5kb downstream 3804 true Chr06: 44827843-44831646 Sorghum bicolor
Sobic.006G079900 0.5kb downstream 0.5kb downstream 500 false Chr06: 44827843-44828342 Sorghum bicolor
Sobic.006G079900 1.0kb upstream 1.0kb upstream 4304 true Chr06: 44828343-44832646 Sorghum bicolor
Sobic.006G079900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 44831647-44832646 Sorghum bicolor
Sobic.006G079900 1.0kb downstream 1.0kb downstream 4304 true Chr06: 44827343-44831646 Sorghum bicolor
Sobic.006G079900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 44827343-44828342 Sorghum bicolor
Sobic.006G079900 2.0kb upstream 2.0kb upstream 5304 true Chr06: 44828343-44833646 Sorghum bicolor
Sobic.006G079900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 44831647-44833646 Sorghum bicolor
Sobic.006G079900 2.0kb downstream 2.0kb downstream 5304 true Chr06: 44826343-44831646 Sorghum bicolor
Sobic.006G079900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 44826343-44828342 Sorghum bicolor
Sobic.006G079900 5.0kb upstream 5.0kb upstream 8304 true Chr06: 44828343-44836646 Sorghum bicolor
Sobic.006G079900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 44831647-44836646 Sorghum bicolor
Sobic.006G079900 5.0kb downstream 5.0kb downstream 8304 true Chr06: 44823343-44831646 Sorghum bicolor
Sobic.006G079900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 44823343-44828342 Sorghum bicolor
Sobic.006G079900 10.0kb upstream 10.0kb upstream 13304 true Chr06: 44828343-44841646 Sorghum bicolor
Sobic.006G079900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 44831647-44841646 Sorghum bicolor
Sobic.006G079900 10.0kb downstream 10.0kb downstream 13304 true Chr06: 44818343-44831646 Sorghum bicolor
Sobic.006G079900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 44818343-44828342 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190631 5267 Panicoideae View MSA
124577603 5269 Grass View MSA
122042983 5273 Angiosperm View MSA
121348837 5274 Embryophyte View MSA
123425224 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.399     High High
cufflinks 1.227       Low
cufflinks 2.572       Low
cufflinks 6.721        
cufflinks 8.504        
cufflinks 4.226        
cufflinks 6.104        
cufflinks 1.51       Low
cufflinks 7.407        
cufflinks 8.691        
cufflinks 7.016        
cufflinks 8.303        
cufflinks 5.684        
cufflinks 7.531        
cufflinks 7.638        
cufflinks 2.816       Low
cufflinks 6.526        
cufflinks 6.587        
cufflinks 1.75       Low
cufflinks 7.409        
cufflinks 13.814       High
cufflinks 9.255        
cufflinks 8.304        
cufflinks 8.359        
cufflinks 2.117       Low
cufflinks 1.051       Low
cufflinks 5.979        
cufflinks 10.795     High  
cufflinks 4.086        
cufflinks 12.288     High High

0 Strain