Gene : Sobic.002G107200 S. bicolor v3.1.1
Defline:  (1 of 4) PTHR11908//PTHR11908:SF89 - XANTHINE DEHYDROGENASE // SUBFAMILY NOT NAMED Genomic Order:  1087
Name:  ? Sobic.002G107200 Secondary Identifier:  ? PAC:37950085
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G107200 0.5kb upstream 0.5kb upstream 22747 true Chr02: 12884128-12906874 Sorghum bicolor
Sobic.002G107200 0.5kb upstream 0.5kb upstream 500 false Chr02: 12884128-12884627 Sorghum bicolor
Sobic.002G107200 0.5kb downstream 0.5kb downstream 22747 true Chr02: 12884628-12907374 Sorghum bicolor
Sobic.002G107200 0.5kb downstream 0.5kb downstream 500 false Chr02: 12906875-12907374 Sorghum bicolor
Sobic.002G107200 1.0kb upstream 1.0kb upstream 23247 true Chr02: 12883628-12906874 Sorghum bicolor
Sobic.002G107200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 12883628-12884627 Sorghum bicolor
Sobic.002G107200 1.0kb downstream 1.0kb downstream 23247 true Chr02: 12884628-12907874 Sorghum bicolor
Sobic.002G107200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 12906875-12907874 Sorghum bicolor
Sobic.002G107200 2.0kb upstream 2.0kb upstream 24247 true Chr02: 12882628-12906874 Sorghum bicolor
Sobic.002G107200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 12882628-12884627 Sorghum bicolor
Sobic.002G107200 2.0kb downstream 2.0kb downstream 24247 true Chr02: 12884628-12908874 Sorghum bicolor
Sobic.002G107200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 12906875-12908874 Sorghum bicolor
Sobic.002G107200 5.0kb upstream 5.0kb upstream 27247 true Chr02: 12879628-12906874 Sorghum bicolor
Sobic.002G107200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 12879628-12884627 Sorghum bicolor
Sobic.002G107200 5.0kb downstream 5.0kb downstream 27247 true Chr02: 12884628-12911874 Sorghum bicolor
Sobic.002G107200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 12906875-12911874 Sorghum bicolor
Sobic.002G107200 10.0kb upstream 10.0kb upstream 32247 true Chr02: 12874628-12906874 Sorghum bicolor
Sobic.002G107200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 12874628-12884627 Sorghum bicolor
Sobic.002G107200 10.0kb downstream 10.0kb downstream 32247 true Chr02: 12884628-12916874 Sorghum bicolor
Sobic.002G107200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 12906875-12916874 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180330 5267 Panicoideae View MSA
124570706 5269 Grass View MSA
122051504 5273 Angiosperm View MSA
121345384 5274 Embryophyte View MSA
123426829 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.116       Low
cufflinks 0.047       Low
cufflinks 0.316        
cufflinks 0.249        
cufflinks 0.973        
cufflinks 0.232        
cufflinks 0.429        
cufflinks 0.193        
cufflinks 1.043        
cufflinks 1.248       High
cufflinks 0.997        
cufflinks 1.227        
cufflinks 0.271        
cufflinks 1.208        
cufflinks 1.746       High
cufflinks 0.097       Low
cufflinks 0.364        
cufflinks 0.431        
cufflinks 0.179        
cufflinks 0.403        
cufflinks 2.026       High
cufflinks 0.587        
cufflinks 0.787        
cufflinks 0.941        
cufflinks 0.199        
cufflinks 0.087       Low
cufflinks 1.279       High
cufflinks 0.023     Low Low
cufflinks 0.354        
cufflinks 4.753       High

0 Strain