Gene : Sobic.002G107000 S. bicolor v3.1.1
Defline:  (1 of 4) PTHR11908//PTHR11908:SF89 - XANTHINE DEHYDROGENASE // SUBFAMILY NOT NAMED Genomic Order:  1086
Name:  ? Sobic.002G107000 Secondary Identifier:  ? PAC:37950748
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G107000 0.5kb upstream 0.5kb upstream 16278 true Chr02: 12788704-12804981 Sorghum bicolor
Sobic.002G107000 0.5kb upstream 0.5kb upstream 500 false Chr02: 12788704-12789203 Sorghum bicolor
Sobic.002G107000 0.5kb downstream 0.5kb downstream 16278 true Chr02: 12789204-12805481 Sorghum bicolor
Sobic.002G107000 0.5kb downstream 0.5kb downstream 500 false Chr02: 12804982-12805481 Sorghum bicolor
Sobic.002G107000 1.0kb upstream 1.0kb upstream 16778 true Chr02: 12788204-12804981 Sorghum bicolor
Sobic.002G107000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 12788204-12789203 Sorghum bicolor
Sobic.002G107000 1.0kb downstream 1.0kb downstream 16778 true Chr02: 12789204-12805981 Sorghum bicolor
Sobic.002G107000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 12804982-12805981 Sorghum bicolor
Sobic.002G107000 2.0kb upstream 2.0kb upstream 17778 true Chr02: 12787204-12804981 Sorghum bicolor
Sobic.002G107000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 12787204-12789203 Sorghum bicolor
Sobic.002G107000 2.0kb downstream 2.0kb downstream 17778 true Chr02: 12789204-12806981 Sorghum bicolor
Sobic.002G107000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 12804982-12806981 Sorghum bicolor
Sobic.002G107000 5.0kb upstream 5.0kb upstream 20778 true Chr02: 12784204-12804981 Sorghum bicolor
Sobic.002G107000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 12784204-12789203 Sorghum bicolor
Sobic.002G107000 5.0kb downstream 5.0kb downstream 20778 true Chr02: 12789204-12809981 Sorghum bicolor
Sobic.002G107000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 12804982-12809981 Sorghum bicolor
Sobic.002G107000 10.0kb upstream 10.0kb upstream 25778 true Chr02: 12779204-12804981 Sorghum bicolor
Sobic.002G107000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 12779204-12789203 Sorghum bicolor
Sobic.002G107000 10.0kb downstream 10.0kb downstream 25778 true Chr02: 12789204-12814981 Sorghum bicolor
Sobic.002G107000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 12804982-12814981 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180330 5267 Panicoideae View MSA
124570706 5269 Grass View MSA
122051504 5273 Angiosperm View MSA
121345384 5274 Embryophyte View MSA
123426829 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.105        
cufflinks 0.631        
cufflinks 0.129       Low
cufflinks 0.118       Low
cufflinks 1.276        
cufflinks 0.51        
cufflinks 8.266       High
cufflinks 19.617     High High
cufflinks 0.664        
cufflinks 0.727        
cufflinks 1.38        
cufflinks 1.757        
cufflinks 0.648        
cufflinks 2.067        
cufflinks 1.635        
cufflinks 0.645        
cufflinks 8.808       High
cufflinks 8.333       High
cufflinks 1.97        
cufflinks 1.201        
cufflinks 1.849        
cufflinks 5.533        
cufflinks 4.019        
cufflinks 4.447        
cufflinks 0.201       Low
cufflinks 0.994        
cufflinks 0.544        
cufflinks 0.175       Low
cufflinks 35.788     High High
cufflinks 1.321        

0 Strain