Gene : Sobic.002G107600 S. bicolor v3.1.1
Defline:  (1 of 1) PF00941//PF01315//PF01799//PF02738//PF03450 - FAD binding domain in molybdopterin dehydrogenase (FAD_binding_5) // Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain (Ald_Xan_dh_C) // [2Fe-2S] binding domain (Fer2_2) // Molybdopterin-binding domain of aldehyde dehydrogenase (Ald_Xan_dh_C2) // CO dehydrogenase flavoprotein C-terminal domain (CO_deh_flav_C) Genomic Order:  1091
Name:  ? Sobic.002G107600 Secondary Identifier:  ? PAC:37953646
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G107600 0.5kb upstream 0.5kb upstream 23143 true Chr02: 12990966-13014108 Sorghum bicolor
Sobic.002G107600 0.5kb upstream 0.5kb upstream 500 false Chr02: 12990966-12991465 Sorghum bicolor
Sobic.002G107600 0.5kb downstream 0.5kb downstream 23143 true Chr02: 12991466-13014608 Sorghum bicolor
Sobic.002G107600 0.5kb downstream 0.5kb downstream 500 false Chr02: 13014109-13014608 Sorghum bicolor
Sobic.002G107600 1.0kb upstream 1.0kb upstream 23643 true Chr02: 12990466-13014108 Sorghum bicolor
Sobic.002G107600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 12990466-12991465 Sorghum bicolor
Sobic.002G107600 1.0kb downstream 1.0kb downstream 23643 true Chr02: 12991466-13015108 Sorghum bicolor
Sobic.002G107600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 13014109-13015108 Sorghum bicolor
Sobic.002G107600 2.0kb upstream 2.0kb upstream 24643 true Chr02: 12989466-13014108 Sorghum bicolor
Sobic.002G107600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 12989466-12991465 Sorghum bicolor
Sobic.002G107600 2.0kb downstream 2.0kb downstream 24643 true Chr02: 12991466-13016108 Sorghum bicolor
Sobic.002G107600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 13014109-13016108 Sorghum bicolor
Sobic.002G107600 5.0kb upstream 5.0kb upstream 27643 true Chr02: 12986466-13014108 Sorghum bicolor
Sobic.002G107600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 12986466-12991465 Sorghum bicolor
Sobic.002G107600 5.0kb downstream 5.0kb downstream 27643 true Chr02: 12991466-13019108 Sorghum bicolor
Sobic.002G107600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 13014109-13019108 Sorghum bicolor
Sobic.002G107600 10.0kb upstream 10.0kb upstream 32643 true Chr02: 12981466-13014108 Sorghum bicolor
Sobic.002G107600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 12981466-12991465 Sorghum bicolor
Sobic.002G107600 10.0kb downstream 10.0kb downstream 32643 true Chr02: 12991466-13024108 Sorghum bicolor
Sobic.002G107600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 13014109-13024108 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180330 5267 Panicoideae View MSA
124570706 5269 Grass View MSA
122051504 5273 Angiosperm View MSA
121345384 5274 Embryophyte View MSA
123426829 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.116        
cufflinks 0.033     Low Low
cufflinks 0.014     Low Low
cufflinks 0.027     Low Low
cufflinks 0.566        
cufflinks 0.63        
cufflinks 0.713        
cufflinks 0.394        
cufflinks 0.139        
cufflinks 0.167        
cufflinks 0.308        
cufflinks 0.262        
cufflinks 0.119        
cufflinks 0.318        
cufflinks 1.403       High
cufflinks 0.031     Low Low
cufflinks 0.766        
cufflinks 0.735        
cufflinks 0.085     Low  
cufflinks 0.857       High
cufflinks 1.094       High
cufflinks 0.245        
cufflinks 0.382        
cufflinks 0.284        
cufflinks 0.11        
cufflinks 0.022     Low Low
cufflinks 0.382        
cufflinks 0.095        
cufflinks 1.233       High
cufflinks 1.817       High

0 Strain