Gene : Sobic.006G082900 S. bicolor v3.1.1
Defline:  similar to OSJNBa0084A10.10 protein Genomic Order:  862
Name:  ? Sobic.006G082900 Secondary Identifier:  ? PAC:37949092
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G082900 0.5kb upstream 0.5kb upstream 3554 true Chr06: 45165720-45169273 Sorghum bicolor
Sobic.006G082900 0.5kb upstream 0.5kb upstream 500 false Chr06: 45168774-45169273 Sorghum bicolor
Sobic.006G082900 0.5kb downstream 0.5kb downstream 3554 true Chr06: 45165220-45168773 Sorghum bicolor
Sobic.006G082900 0.5kb downstream 0.5kb downstream 500 false Chr06: 45165220-45165719 Sorghum bicolor
Sobic.006G082900 1.0kb upstream 1.0kb upstream 4054 true Chr06: 45165720-45169773 Sorghum bicolor
Sobic.006G082900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 45168774-45169773 Sorghum bicolor
Sobic.006G082900 1.0kb downstream 1.0kb downstream 4054 true Chr06: 45164720-45168773 Sorghum bicolor
Sobic.006G082900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 45164720-45165719 Sorghum bicolor
Sobic.006G082900 2.0kb upstream 2.0kb upstream 5054 true Chr06: 45165720-45170773 Sorghum bicolor
Sobic.006G082900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 45168774-45170773 Sorghum bicolor
Sobic.006G082900 2.0kb downstream 2.0kb downstream 5054 true Chr06: 45163720-45168773 Sorghum bicolor
Sobic.006G082900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 45163720-45165719 Sorghum bicolor
Sobic.006G082900 5.0kb upstream 5.0kb upstream 8054 true Chr06: 45165720-45173773 Sorghum bicolor
Sobic.006G082900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 45168774-45173773 Sorghum bicolor
Sobic.006G082900 5.0kb downstream 5.0kb downstream 8054 true Chr06: 45160720-45168773 Sorghum bicolor
Sobic.006G082900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 45160720-45165719 Sorghum bicolor
Sobic.006G082900 10.0kb upstream 10.0kb upstream 13054 true Chr06: 45165720-45178773 Sorghum bicolor
Sobic.006G082900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 45168774-45178773 Sorghum bicolor
Sobic.006G082900 10.0kb downstream 10.0kb downstream 13054 true Chr06: 45155720-45168773 Sorghum bicolor
Sobic.006G082900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 45155720-45165719 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179316 5267 Panicoideae View MSA
124569672 5269 Grass View MSA
122044217 5273 Angiosperm View MSA
121310256 5274 Embryophyte View MSA
123347795 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.0     High High
cufflinks 5.304       Low
cufflinks 12.487     High  
cufflinks 20.187     High High
cufflinks 18.286     High  
cufflinks 26.078     High High
cufflinks 12.825     High  
cufflinks 6.866       Low
cufflinks 17.012     High  
cufflinks 15.336     High  
cufflinks 11.247        
cufflinks 9.788        
cufflinks 13.863     High  
cufflinks 12.206     High  
cufflinks 17.903     High  
cufflinks 12.718     High  
cufflinks 12.523     High  
cufflinks 13.23     High  
cufflinks 11.38     High  
cufflinks 15.193     High  
cufflinks 18.532     High  
cufflinks 15.624     High  
cufflinks 14.415     High  
cufflinks 13.135     High  
cufflinks 7.805       Low
cufflinks 4.421       Low
cufflinks 10.343        
cufflinks 30.723     High High
cufflinks 11.357        
cufflinks 18.454     High  

0 Strain