Gene : Sobic.002G101300 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR10996:SF108 - D-ISOMER SPECIFIC 2-HYDROXYACID DEHYDROGENASE-LIKE PROTEIN Genomic Order:  1028
Name:  ? Sobic.002G101300 Secondary Identifier:  ? PAC:37954943
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G101300 0.5kb upstream 0.5kb upstream 5660 true Chr02: 11453993-11459652 Sorghum bicolor
Sobic.002G101300 0.5kb upstream 0.5kb upstream 500 false Chr02: 11453993-11454492 Sorghum bicolor
Sobic.002G101300 0.5kb downstream 0.5kb downstream 5660 true Chr02: 11454493-11460152 Sorghum bicolor
Sobic.002G101300 0.5kb downstream 0.5kb downstream 500 false Chr02: 11459653-11460152 Sorghum bicolor
Sobic.002G101300 1.0kb upstream 1.0kb upstream 6160 true Chr02: 11453493-11459652 Sorghum bicolor
Sobic.002G101300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 11453493-11454492 Sorghum bicolor
Sobic.002G101300 1.0kb downstream 1.0kb downstream 6160 true Chr02: 11454493-11460652 Sorghum bicolor
Sobic.002G101300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 11459653-11460652 Sorghum bicolor
Sobic.002G101300 2.0kb upstream 2.0kb upstream 7160 true Chr02: 11452493-11459652 Sorghum bicolor
Sobic.002G101300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 11452493-11454492 Sorghum bicolor
Sobic.002G101300 2.0kb downstream 2.0kb downstream 7160 true Chr02: 11454493-11461652 Sorghum bicolor
Sobic.002G101300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 11459653-11461652 Sorghum bicolor
Sobic.002G101300 5.0kb upstream 5.0kb upstream 10160 true Chr02: 11449493-11459652 Sorghum bicolor
Sobic.002G101300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 11449493-11454492 Sorghum bicolor
Sobic.002G101300 5.0kb downstream 5.0kb downstream 10160 true Chr02: 11454493-11464652 Sorghum bicolor
Sobic.002G101300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 11459653-11464652 Sorghum bicolor
Sobic.002G101300 10.0kb upstream 10.0kb upstream 15160 true Chr02: 11444493-11459652 Sorghum bicolor
Sobic.002G101300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 11444493-11454492 Sorghum bicolor
Sobic.002G101300 10.0kb downstream 10.0kb downstream 15160 true Chr02: 11454493-11469652 Sorghum bicolor
Sobic.002G101300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 11459653-11469652 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183723 5267 Panicoideae View MSA
124587466 5269 Grass View MSA
122051675 5273 Angiosperm View MSA
121344696 5274 Embryophyte View MSA
123427510 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.964       Low
cufflinks 0.726       Low
cufflinks 1.68       Low
cufflinks 3.71        
cufflinks 8.31        
cufflinks 12.205        
cufflinks 4.294        
cufflinks 2.058        
cufflinks 12.754     High  
cufflinks 13.395     High  
cufflinks 23.676     High High
cufflinks 19.026     High High
cufflinks 17.024     High  
cufflinks 14.196     High  
cufflinks 9.839        
cufflinks 1.409       Low
cufflinks 4.402        
cufflinks 4.764        
cufflinks 1.321       Low
cufflinks 4.307        
cufflinks 11.101        
cufflinks 12.043     High  
cufflinks 20.089     High High
cufflinks 19.417     High High
cufflinks 0.786       Low
cufflinks 0.718       Low
cufflinks 18.057     High High
cufflinks 0.187       Low
cufflinks 4.067        
cufflinks 9.764        

0 Strain