Gene : Sobic.006G083201 S. bicolor v3.1.1
Defline:  (1 of 81) PF03514 - GRAS domain family (GRAS) Genomic Order:  866
Name:  ? Sobic.006G083201 Secondary Identifier:  ? PAC:37949381
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G083201 0.5kb upstream 0.5kb upstream 3686 true Chr06: 45194966-45198651 Sorghum bicolor
Sobic.006G083201 0.5kb upstream 0.5kb upstream 500 false Chr06: 45198152-45198651 Sorghum bicolor
Sobic.006G083201 0.5kb downstream 0.5kb downstream 3686 true Chr06: 45194466-45198151 Sorghum bicolor
Sobic.006G083201 0.5kb downstream 0.5kb downstream 500 false Chr06: 45194466-45194965 Sorghum bicolor
Sobic.006G083201 1.0kb upstream 1.0kb upstream 4186 true Chr06: 45194966-45199151 Sorghum bicolor
Sobic.006G083201 1.0kb upstream 1.0kb upstream 1000 false Chr06: 45198152-45199151 Sorghum bicolor
Sobic.006G083201 1.0kb downstream 1.0kb downstream 4186 true Chr06: 45193966-45198151 Sorghum bicolor
Sobic.006G083201 1.0kb downstream 1.0kb downstream 1000 false Chr06: 45193966-45194965 Sorghum bicolor
Sobic.006G083201 2.0kb upstream 2.0kb upstream 5186 true Chr06: 45194966-45200151 Sorghum bicolor
Sobic.006G083201 2.0kb upstream 2.0kb upstream 2000 false Chr06: 45198152-45200151 Sorghum bicolor
Sobic.006G083201 2.0kb downstream 2.0kb downstream 5186 true Chr06: 45192966-45198151 Sorghum bicolor
Sobic.006G083201 2.0kb downstream 2.0kb downstream 2000 false Chr06: 45192966-45194965 Sorghum bicolor
Sobic.006G083201 5.0kb upstream 5.0kb upstream 8186 true Chr06: 45194966-45203151 Sorghum bicolor
Sobic.006G083201 5.0kb upstream 5.0kb upstream 5000 false Chr06: 45198152-45203151 Sorghum bicolor
Sobic.006G083201 5.0kb downstream 5.0kb downstream 8186 true Chr06: 45189966-45198151 Sorghum bicolor
Sobic.006G083201 5.0kb downstream 5.0kb downstream 5000 false Chr06: 45189966-45194965 Sorghum bicolor
Sobic.006G083201 10.0kb upstream 10.0kb upstream 13186 true Chr06: 45194966-45208151 Sorghum bicolor
Sobic.006G083201 10.0kb upstream 10.0kb upstream 10000 false Chr06: 45198152-45208151 Sorghum bicolor
Sobic.006G083201 10.0kb downstream 10.0kb downstream 13186 true Chr06: 45184966-45198151 Sorghum bicolor
Sobic.006G083201 10.0kb downstream 10.0kb downstream 10000 false Chr06: 45184966-45194965 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122198276 5267 Panicoideae View MSA
124579769 5269 Grass View MSA
122048642 5273 Angiosperm View MSA
121311053 5274 Embryophyte View MSA
123348407 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.048     Low  
cufflinks 0.029     Low  
cufflinks 0.255        
cufflinks 0.132        
cufflinks 0.053     Low  
cufflinks 0.018     Low Low
cufflinks 0.214        
cufflinks 0.045     Low  
cufflinks 0.026     Low Low
cufflinks 0.111        
cufflinks 0.79       High
cufflinks 1.039       High
cufflinks 0.042     Low  
cufflinks 0.537       High
cufflinks 0.044     Low  
cufflinks 0.288        
cufflinks 0.214        
cufflinks 0.088     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.085     Low  
cufflinks 0.018     Low Low
cufflinks 0.41       High
cufflinks 1.017       High
cufflinks 0.867       High
cufflinks 0.043     Low  
cufflinks 0.034     Low  
cufflinks 0.553       High
cufflinks 0.061     Low  
cufflinks 0.061     Low  
cufflinks 0.032     Low  

0 Strain