Gene : Sobic.002G104900 S. bicolor v3.1.1
Defline:  (1 of 4) PF06522 - NADH-ubiquinone reductase complex 1 MLRQ subunit (B12D) Genomic Order:  1066
Name:  ? Sobic.002G104900 Secondary Identifier:  ? PAC:37952431
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G104900 0.5kb upstream 0.5kb upstream 1349 true Chr02: 12427387-12428735 Sorghum bicolor
Sobic.002G104900 0.5kb upstream 0.5kb upstream 500 false Chr02: 12427387-12427886 Sorghum bicolor
Sobic.002G104900 0.5kb downstream 0.5kb downstream 1349 true Chr02: 12427887-12429235 Sorghum bicolor
Sobic.002G104900 0.5kb downstream 0.5kb downstream 500 false Chr02: 12428736-12429235 Sorghum bicolor
Sobic.002G104900 1.0kb upstream 1.0kb upstream 1849 true Chr02: 12426887-12428735 Sorghum bicolor
Sobic.002G104900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 12426887-12427886 Sorghum bicolor
Sobic.002G104900 1.0kb downstream 1.0kb downstream 1849 true Chr02: 12427887-12429735 Sorghum bicolor
Sobic.002G104900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 12428736-12429735 Sorghum bicolor
Sobic.002G104900 2.0kb upstream 2.0kb upstream 2849 true Chr02: 12425887-12428735 Sorghum bicolor
Sobic.002G104900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 12425887-12427886 Sorghum bicolor
Sobic.002G104900 2.0kb downstream 2.0kb downstream 2849 true Chr02: 12427887-12430735 Sorghum bicolor
Sobic.002G104900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 12428736-12430735 Sorghum bicolor
Sobic.002G104900 5.0kb upstream 5.0kb upstream 5849 true Chr02: 12422887-12428735 Sorghum bicolor
Sobic.002G104900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 12422887-12427886 Sorghum bicolor
Sobic.002G104900 5.0kb downstream 5.0kb downstream 5849 true Chr02: 12427887-12433735 Sorghum bicolor
Sobic.002G104900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 12428736-12433735 Sorghum bicolor
Sobic.002G104900 10.0kb upstream 10.0kb upstream 10849 true Chr02: 12417887-12428735 Sorghum bicolor
Sobic.002G104900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 12417887-12427886 Sorghum bicolor
Sobic.002G104900 10.0kb downstream 10.0kb downstream 10849 true Chr02: 12427887-12438735 Sorghum bicolor
Sobic.002G104900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 12428736-12438735 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195935 5267 Panicoideae View MSA
124574225 5269 Grass View MSA
122049725 5273 Angiosperm View MSA
121344537 5274 Embryophyte View MSA
123428390 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 539.101     High High
cufflinks 12.084     High Low
cufflinks 165.755     High High
cufflinks 147.495     High High
cufflinks 52.777     High  
cufflinks 28.027     High  
cufflinks 20.99     High  
cufflinks 10.309     High Low
cufflinks 75.515     High  
cufflinks 72.042     High  
cufflinks 121.816     High  
cufflinks 54.713     High  
cufflinks 44.96     High  
cufflinks 81.602     High  
cufflinks 108.846     High  
cufflinks 34.881     High  
cufflinks 23.854     High  
cufflinks 17.184     High  
cufflinks 21.854     High  
cufflinks 28.807     High  
cufflinks 1.921       Low
cufflinks 146.869     High  
cufflinks 90.221     High  
cufflinks 91.63     High  
cufflinks 15.107     High Low
cufflinks 12.576     High Low
cufflinks 53.475     High  
cufflinks 63.825     High  
cufflinks 14.239     High Low
cufflinks 106.16     High  

0 Strain