Gene : Sobic.002G095800 S. bicolor v3.1.1
Defline:  (1 of 1) PF15072 - Domain of unknown function (DUF4539) (DUF4539) Genomic Order:  968
Name:  ? Sobic.002G095800 Secondary Identifier:  ? PAC:37954096
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G095800 0.5kb upstream 0.5kb upstream 8106 true Chr02: 9895247-9903352 Sorghum bicolor
Sobic.002G095800 0.5kb upstream 0.5kb upstream 500 false Chr02: 9902853-9903352 Sorghum bicolor
Sobic.002G095800 0.5kb downstream 0.5kb downstream 8106 true Chr02: 9894747-9902852 Sorghum bicolor
Sobic.002G095800 0.5kb downstream 0.5kb downstream 500 false Chr02: 9894747-9895246 Sorghum bicolor
Sobic.002G095800 1.0kb upstream 1.0kb upstream 8606 true Chr02: 9895247-9903852 Sorghum bicolor
Sobic.002G095800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 9902853-9903852 Sorghum bicolor
Sobic.002G095800 1.0kb downstream 1.0kb downstream 8606 true Chr02: 9894247-9902852 Sorghum bicolor
Sobic.002G095800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 9894247-9895246 Sorghum bicolor
Sobic.002G095800 2.0kb upstream 2.0kb upstream 9606 true Chr02: 9895247-9904852 Sorghum bicolor
Sobic.002G095800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 9902853-9904852 Sorghum bicolor
Sobic.002G095800 2.0kb downstream 2.0kb downstream 9606 true Chr02: 9893247-9902852 Sorghum bicolor
Sobic.002G095800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 9893247-9895246 Sorghum bicolor
Sobic.002G095800 5.0kb upstream 5.0kb upstream 12606 true Chr02: 9895247-9907852 Sorghum bicolor
Sobic.002G095800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 9902853-9907852 Sorghum bicolor
Sobic.002G095800 5.0kb downstream 5.0kb downstream 12606 true Chr02: 9890247-9902852 Sorghum bicolor
Sobic.002G095800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 9890247-9895246 Sorghum bicolor
Sobic.002G095800 10.0kb upstream 10.0kb upstream 17606 true Chr02: 9895247-9912852 Sorghum bicolor
Sobic.002G095800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 9902853-9912852 Sorghum bicolor
Sobic.002G095800 10.0kb downstream 10.0kb downstream 17606 true Chr02: 9885247-9902852 Sorghum bicolor
Sobic.002G095800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 9885247-9895246 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191779 5267 Panicoideae View MSA
124583504 5269 Grass View MSA
122049874 5273 Angiosperm View MSA
121311625 5274 Embryophyte View MSA
123348898 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.305       High
cufflinks 0.005     Low Low
cufflinks 0.025     Low  
cufflinks 0.022     Low Low
cufflinks 0.322       High
cufflinks 0.102     Low  
cufflinks 0.104        
cufflinks 0.008     Low Low
cufflinks 0.151        
cufflinks 0.153        
cufflinks 0.104        
cufflinks 0.135        
cufflinks 0.078        
cufflinks 0.115        
cufflinks 0.102        
cufflinks 0.014     Low Low
cufflinks 0.107        
cufflinks 0.139        
cufflinks 0.009     Low Low
cufflinks 0.104     Low  
cufflinks 0.411       High
cufflinks 0.183        
cufflinks 0.119        
cufflinks 0.126        
cufflinks 0.01     Low Low
cufflinks 0.006     Low Low
cufflinks 0.056     Low  
cufflinks 0.195        
cufflinks 0.042     Low  
cufflinks 0.217        

0 Strain