Gene : Sobic.006G088000 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR22904:SF373 - PROTEIN TIC 40, CHLOROPLASTIC Genomic Order:  911
Name:  ? Sobic.006G088000 Secondary Identifier:  ? PAC:37945871
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G088000 0.5kb upstream 0.5kb upstream 7291 true Chr06: 45714422-45721712 Sorghum bicolor
Sobic.006G088000 0.5kb upstream 0.5kb upstream 500 false Chr06: 45721213-45721712 Sorghum bicolor
Sobic.006G088000 0.5kb downstream 0.5kb downstream 7291 true Chr06: 45713922-45721212 Sorghum bicolor
Sobic.006G088000 0.5kb downstream 0.5kb downstream 500 false Chr06: 45713922-45714421 Sorghum bicolor
Sobic.006G088000 1.0kb upstream 1.0kb upstream 7791 true Chr06: 45714422-45722212 Sorghum bicolor
Sobic.006G088000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 45721213-45722212 Sorghum bicolor
Sobic.006G088000 1.0kb downstream 1.0kb downstream 7791 true Chr06: 45713422-45721212 Sorghum bicolor
Sobic.006G088000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 45713422-45714421 Sorghum bicolor
Sobic.006G088000 2.0kb upstream 2.0kb upstream 8791 true Chr06: 45714422-45723212 Sorghum bicolor
Sobic.006G088000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 45721213-45723212 Sorghum bicolor
Sobic.006G088000 2.0kb downstream 2.0kb downstream 8791 true Chr06: 45712422-45721212 Sorghum bicolor
Sobic.006G088000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 45712422-45714421 Sorghum bicolor
Sobic.006G088000 5.0kb upstream 5.0kb upstream 11791 true Chr06: 45714422-45726212 Sorghum bicolor
Sobic.006G088000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 45721213-45726212 Sorghum bicolor
Sobic.006G088000 5.0kb downstream 5.0kb downstream 11791 true Chr06: 45709422-45721212 Sorghum bicolor
Sobic.006G088000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 45709422-45714421 Sorghum bicolor
Sobic.006G088000 10.0kb upstream 10.0kb upstream 16791 true Chr06: 45714422-45731212 Sorghum bicolor
Sobic.006G088000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 45721213-45731212 Sorghum bicolor
Sobic.006G088000 10.0kb downstream 10.0kb downstream 16791 true Chr06: 45704422-45721212 Sorghum bicolor
Sobic.006G088000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 45704422-45714421 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183061 5267 Panicoideae View MSA
124588048 5269 Grass View MSA
122043574 5273 Angiosperm View MSA
121344558 5274 Embryophyte View MSA
123424576 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.589        
cufflinks 3.449       Low
cufflinks 7.402        
cufflinks 12.804     High  
cufflinks 9.806        
cufflinks 13.798     High High
cufflinks 13.169     High  
cufflinks 9.595     High  
cufflinks 11.172        
cufflinks 12.095     High  
cufflinks 6.286        
cufflinks 7.096        
cufflinks 7.542        
cufflinks 5.618        
cufflinks 9.485        
cufflinks 5.399        
cufflinks 13.873     High High
cufflinks 17.127     High High
cufflinks 5.949        
cufflinks 8.231        
cufflinks 13.106        
cufflinks 7.56        
cufflinks 6.198        
cufflinks 6.388        
cufflinks 4.01       Low
cufflinks 2.404       Low
cufflinks 8.844        
cufflinks 7.381        
cufflinks 36.033     High High
cufflinks 13.244     High  

0 Strain