Gene : Sobic.002G085900 S. bicolor v3.1.1
Defline:  weakly similar to Expressed protein Genomic Order:  882
Name:  ? Sobic.002G085900 Secondary Identifier:  ? PAC:37955615
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G085900 0.5kb upstream 0.5kb upstream 1109 true Chr02: 9142508-9143616 Sorghum bicolor
Sobic.002G085900 0.5kb upstream 0.5kb upstream 500 false Chr02: 9143117-9143616 Sorghum bicolor
Sobic.002G085900 0.5kb downstream 0.5kb downstream 1109 true Chr02: 9142008-9143116 Sorghum bicolor
Sobic.002G085900 0.5kb downstream 0.5kb downstream 500 false Chr02: 9142008-9142507 Sorghum bicolor
Sobic.002G085900 1.0kb upstream 1.0kb upstream 1609 true Chr02: 9142508-9144116 Sorghum bicolor
Sobic.002G085900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 9143117-9144116 Sorghum bicolor
Sobic.002G085900 1.0kb downstream 1.0kb downstream 1609 true Chr02: 9141508-9143116 Sorghum bicolor
Sobic.002G085900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 9141508-9142507 Sorghum bicolor
Sobic.002G085900 2.0kb upstream 2.0kb upstream 2609 true Chr02: 9142508-9145116 Sorghum bicolor
Sobic.002G085900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 9143117-9145116 Sorghum bicolor
Sobic.002G085900 2.0kb downstream 2.0kb downstream 2609 true Chr02: 9140508-9143116 Sorghum bicolor
Sobic.002G085900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 9140508-9142507 Sorghum bicolor
Sobic.002G085900 5.0kb upstream 5.0kb upstream 5609 true Chr02: 9142508-9148116 Sorghum bicolor
Sobic.002G085900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 9143117-9148116 Sorghum bicolor
Sobic.002G085900 5.0kb downstream 5.0kb downstream 5609 true Chr02: 9137508-9143116 Sorghum bicolor
Sobic.002G085900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 9137508-9142507 Sorghum bicolor
Sobic.002G085900 10.0kb upstream 10.0kb upstream 10609 true Chr02: 9142508-9153116 Sorghum bicolor
Sobic.002G085900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 9143117-9153116 Sorghum bicolor
Sobic.002G085900 10.0kb downstream 10.0kb downstream 10609 true Chr02: 9132508-9143116 Sorghum bicolor
Sobic.002G085900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 9132508-9142507 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994570 5273 Angiosperm View MSA
122188977 5267 Panicoideae View MSA
124584771 5269 Grass View MSA
121264794 5274 Embryophyte View MSA
123303225 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 83.651     High High
cufflinks 0.374        
cufflinks 0.025     Low Low
cufflinks 0.062     Low Low
cufflinks 3.123        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.09        
cufflinks 1.165        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.189       Low
cufflinks 36.243     High High
cufflinks 21.297     High  
cufflinks 0.09       Low
cufflinks 45.446     High High
cufflinks 25.295     High  
cufflinks 0.094       Low
cufflinks 2.751        
cufflinks 3.291        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.84        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 116.367     High High
cufflinks 42.743     High High
cufflinks 45.522     High High
cufflinks 0.168       Low
cufflinks 0.727        
cufflinks 5.915        
cufflinks 5.742        
cufflinks 2.079        
cufflinks 1.357        

0 Strain