Gene : Sobic.006G021600 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR35514:SF1 - THYLAKOID LUMENAL 15.0 KDA PROTEIN 2, CHLOROPLASTIC Genomic Order:  227
Name:  ? Sobic.006G021600 Secondary Identifier:  ? PAC:37947928
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G021600 0.5kb upstream 0.5kb upstream 3941 true Chr06: 3811407-3815347 Sorghum bicolor
Sobic.006G021600 0.5kb upstream 0.5kb upstream 500 false Chr06: 3814848-3815347 Sorghum bicolor
Sobic.006G021600 0.5kb downstream 0.5kb downstream 3941 true Chr06: 3810907-3814847 Sorghum bicolor
Sobic.006G021600 0.5kb downstream 0.5kb downstream 500 false Chr06: 3810907-3811406 Sorghum bicolor
Sobic.006G021600 1.0kb upstream 1.0kb upstream 4441 true Chr06: 3811407-3815847 Sorghum bicolor
Sobic.006G021600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 3814848-3815847 Sorghum bicolor
Sobic.006G021600 1.0kb downstream 1.0kb downstream 4441 true Chr06: 3810407-3814847 Sorghum bicolor
Sobic.006G021600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 3810407-3811406 Sorghum bicolor
Sobic.006G021600 2.0kb upstream 2.0kb upstream 5441 true Chr06: 3811407-3816847 Sorghum bicolor
Sobic.006G021600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 3814848-3816847 Sorghum bicolor
Sobic.006G021600 2.0kb downstream 2.0kb downstream 5441 true Chr06: 3809407-3814847 Sorghum bicolor
Sobic.006G021600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 3809407-3811406 Sorghum bicolor
Sobic.006G021600 5.0kb upstream 5.0kb upstream 8441 true Chr06: 3811407-3819847 Sorghum bicolor
Sobic.006G021600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 3814848-3819847 Sorghum bicolor
Sobic.006G021600 5.0kb downstream 5.0kb downstream 8441 true Chr06: 3806407-3814847 Sorghum bicolor
Sobic.006G021600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 3806407-3811406 Sorghum bicolor
Sobic.006G021600 10.0kb upstream 10.0kb upstream 13441 true Chr06: 3811407-3824847 Sorghum bicolor
Sobic.006G021600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 3814848-3824847 Sorghum bicolor
Sobic.006G021600 10.0kb downstream 10.0kb downstream 13441 true Chr06: 3801407-3814847 Sorghum bicolor
Sobic.006G021600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 3801407-3811406 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177830 5267 Panicoideae View MSA
124581506 5269 Grass View MSA
122051168 5273 Angiosperm View MSA
121346154 5274 Embryophyte View MSA
123424497 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.183       Low
cufflinks 4.872       High
cufflinks 3.263       High
cufflinks 1.916        
cufflinks 0.79        
cufflinks 2.439        
cufflinks 3.726       High
cufflinks 5.636       High
cufflinks 1.411        
cufflinks 1.285        
cufflinks 0.404        
cufflinks 0.506        
cufflinks 1.125        
cufflinks 0.341       Low
cufflinks 1.272        
cufflinks 3.737       High
cufflinks 3.484       High
cufflinks 4.402       High
cufflinks 2.702        
cufflinks 2.808        
cufflinks 1.111        
cufflinks 0.325       Low
cufflinks 0.319       Low
cufflinks 0.32       Low
cufflinks 3.007        
cufflinks 4.453       High
cufflinks 0.339       Low
cufflinks 0.167       Low
cufflinks 7.182       High
cufflinks 1.302        

0 Strain