Gene : Sobic.002G208700 S. bicolor v3.1.1
Defline:  (1 of 5) PTHR18966//PTHR18966:SF223 - IONOTROPIC GLUTAMATE RECEPTOR // SUBFAMILY NOT NAMED Genomic Order:  2133
Name:  ? Sobic.002G208700 Secondary Identifier:  ? PAC:37951880
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G208700 0.5kb upstream 0.5kb upstream 5579 true Chr02: 60033821-60039399 Sorghum bicolor
Sobic.002G208700 0.5kb upstream 0.5kb upstream 500 false Chr02: 60038900-60039399 Sorghum bicolor
Sobic.002G208700 0.5kb downstream 0.5kb downstream 5579 true Chr02: 60033321-60038899 Sorghum bicolor
Sobic.002G208700 0.5kb downstream 0.5kb downstream 500 false Chr02: 60033321-60033820 Sorghum bicolor
Sobic.002G208700 1.0kb upstream 1.0kb upstream 6079 true Chr02: 60033821-60039899 Sorghum bicolor
Sobic.002G208700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 60038900-60039899 Sorghum bicolor
Sobic.002G208700 1.0kb downstream 1.0kb downstream 6079 true Chr02: 60032821-60038899 Sorghum bicolor
Sobic.002G208700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 60032821-60033820 Sorghum bicolor
Sobic.002G208700 2.0kb upstream 2.0kb upstream 7079 true Chr02: 60033821-60040899 Sorghum bicolor
Sobic.002G208700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 60038900-60040899 Sorghum bicolor
Sobic.002G208700 2.0kb downstream 2.0kb downstream 7079 true Chr02: 60031821-60038899 Sorghum bicolor
Sobic.002G208700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 60031821-60033820 Sorghum bicolor
Sobic.002G208700 5.0kb upstream 5.0kb upstream 10079 true Chr02: 60033821-60043899 Sorghum bicolor
Sobic.002G208700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 60038900-60043899 Sorghum bicolor
Sobic.002G208700 5.0kb downstream 5.0kb downstream 10079 true Chr02: 60028821-60038899 Sorghum bicolor
Sobic.002G208700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 60028821-60033820 Sorghum bicolor
Sobic.002G208700 10.0kb upstream 10.0kb upstream 15079 true Chr02: 60033821-60048899 Sorghum bicolor
Sobic.002G208700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 60038900-60048899 Sorghum bicolor
Sobic.002G208700 10.0kb downstream 10.0kb downstream 15079 true Chr02: 60023821-60038899 Sorghum bicolor
Sobic.002G208700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 60023821-60033820 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122199840 5267 Panicoideae View MSA
124589593 5269 Grass View MSA
122051662 5273 Angiosperm View MSA
121351346 5274 Embryophyte View MSA
123428796 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.001     Low Low
cufflinks 0.151        
cufflinks 1.201       High
cufflinks 1.264       High
cufflinks 0.003     Low Low
cufflinks 0.014     Low  
cufflinks 0.11        
cufflinks 0.011     Low  
cufflinks 0.007     Low Low
cufflinks 0.012     Low  
cufflinks 0.112        
cufflinks 0.406       High
cufflinks 0.002     Low Low
cufflinks 0.105        
cufflinks 0.005     Low Low
cufflinks 0.528       High
cufflinks 0.162        
cufflinks 0.136        
cufflinks 0.025     Low  
cufflinks 0.705       High
cufflinks 0.004     Low Low
cufflinks 0.199        
cufflinks 0.301        
cufflinks 0.229        
cufflinks 0.638       High
cufflinks 0.048        
cufflinks 1.202       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low Low
cufflinks 0.015     Low  

0 Strain