Gene : Sobic.002G202300 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR21094//PTHR21094:SF1 - GOS-28 SNARE- RELATED // GOLGI SNAP RECEPTOR COMPLEX MEMBER 1-1 Genomic Order:  2067
Name:  ? Sobic.002G202300 Secondary Identifier:  ? PAC:37954458
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G202300 0.5kb upstream 0.5kb upstream 7746 true Chr02: 59198690-59206435 Sorghum bicolor
Sobic.002G202300 0.5kb upstream 0.5kb upstream 500 false Chr02: 59205936-59206435 Sorghum bicolor
Sobic.002G202300 0.5kb downstream 0.5kb downstream 7746 true Chr02: 59198190-59205935 Sorghum bicolor
Sobic.002G202300 0.5kb downstream 0.5kb downstream 500 false Chr02: 59198190-59198689 Sorghum bicolor
Sobic.002G202300 1.0kb upstream 1.0kb upstream 8246 true Chr02: 59198690-59206935 Sorghum bicolor
Sobic.002G202300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 59205936-59206935 Sorghum bicolor
Sobic.002G202300 1.0kb downstream 1.0kb downstream 8246 true Chr02: 59197690-59205935 Sorghum bicolor
Sobic.002G202300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 59197690-59198689 Sorghum bicolor
Sobic.002G202300 2.0kb upstream 2.0kb upstream 9246 true Chr02: 59198690-59207935 Sorghum bicolor
Sobic.002G202300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 59205936-59207935 Sorghum bicolor
Sobic.002G202300 2.0kb downstream 2.0kb downstream 9246 true Chr02: 59196690-59205935 Sorghum bicolor
Sobic.002G202300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 59196690-59198689 Sorghum bicolor
Sobic.002G202300 5.0kb upstream 5.0kb upstream 12246 true Chr02: 59198690-59210935 Sorghum bicolor
Sobic.002G202300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 59205936-59210935 Sorghum bicolor
Sobic.002G202300 5.0kb downstream 5.0kb downstream 12246 true Chr02: 59193690-59205935 Sorghum bicolor
Sobic.002G202300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 59193690-59198689 Sorghum bicolor
Sobic.002G202300 10.0kb upstream 10.0kb upstream 17246 true Chr02: 59198690-59215935 Sorghum bicolor
Sobic.002G202300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 59205936-59215935 Sorghum bicolor
Sobic.002G202300 10.0kb downstream 10.0kb downstream 17246 true Chr02: 59188690-59205935 Sorghum bicolor
Sobic.002G202300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 59188690-59198689 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189019 5267 Panicoideae View MSA
124589926 5269 Grass View MSA
122044900 5273 Angiosperm View MSA
121348787 5274 Embryophyte View MSA
123427960 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.835        
cufflinks 0.864       Low
cufflinks 1.712        
cufflinks 2.567        
cufflinks 1.818        
cufflinks 2.372        
cufflinks 2.942        
cufflinks 1.511       Low
cufflinks 3.147        
cufflinks 2.895        
cufflinks 3.373        
cufflinks 4.308       High
cufflinks 4.003        
cufflinks 3.898        
cufflinks 2.712        
cufflinks 1.756        
cufflinks 3.382        
cufflinks 3.166        
cufflinks 1.473       Low
cufflinks 5.408       High
cufflinks 1.298       Low
cufflinks 3.651        
cufflinks 4.088        
cufflinks 3.733        
cufflinks 1.38       Low
cufflinks 0.714       Low
cufflinks 2.892        
cufflinks 1.485       Low
cufflinks 3.596        
cufflinks 2.321        

0 Strain