Gene : Sobic.002G202000 S. bicolor v3.1.1
Defline:  (1 of 3) PF14709 - double strand RNA binding domain from DEAD END PROTEIN 1 (DND1_DSRM) Genomic Order:  2064
Name:  ? Sobic.002G202000 Secondary Identifier:  ? PAC:37949644
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G202000 0.5kb upstream 0.5kb upstream 5613 true Chr02: 59185999-59191611 Sorghum bicolor
Sobic.002G202000 0.5kb upstream 0.5kb upstream 500 false Chr02: 59185999-59186498 Sorghum bicolor
Sobic.002G202000 0.5kb downstream 0.5kb downstream 5613 true Chr02: 59186499-59192111 Sorghum bicolor
Sobic.002G202000 0.5kb downstream 0.5kb downstream 500 false Chr02: 59191612-59192111 Sorghum bicolor
Sobic.002G202000 1.0kb upstream 1.0kb upstream 6113 true Chr02: 59185499-59191611 Sorghum bicolor
Sobic.002G202000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 59185499-59186498 Sorghum bicolor
Sobic.002G202000 1.0kb downstream 1.0kb downstream 6113 true Chr02: 59186499-59192611 Sorghum bicolor
Sobic.002G202000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 59191612-59192611 Sorghum bicolor
Sobic.002G202000 2.0kb upstream 2.0kb upstream 7113 true Chr02: 59184499-59191611 Sorghum bicolor
Sobic.002G202000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 59184499-59186498 Sorghum bicolor
Sobic.002G202000 2.0kb downstream 2.0kb downstream 7113 true Chr02: 59186499-59193611 Sorghum bicolor
Sobic.002G202000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 59191612-59193611 Sorghum bicolor
Sobic.002G202000 5.0kb upstream 5.0kb upstream 10113 true Chr02: 59181499-59191611 Sorghum bicolor
Sobic.002G202000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 59181499-59186498 Sorghum bicolor
Sobic.002G202000 5.0kb downstream 5.0kb downstream 10113 true Chr02: 59186499-59196611 Sorghum bicolor
Sobic.002G202000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 59191612-59196611 Sorghum bicolor
Sobic.002G202000 10.0kb upstream 10.0kb upstream 15113 true Chr02: 59176499-59191611 Sorghum bicolor
Sobic.002G202000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 59176499-59186498 Sorghum bicolor
Sobic.002G202000 10.0kb downstream 10.0kb downstream 15113 true Chr02: 59186499-59201611 Sorghum bicolor
Sobic.002G202000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 59191612-59201611 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028050 5273 Angiosperm View MSA
122193868 5267 Panicoideae View MSA
124590541 5269 Grass View MSA
121297597 5274 Embryophyte View MSA
123335637 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.013       High
cufflinks 1.773       Low
cufflinks 2.509        
cufflinks 4.096        
cufflinks 4.33        
cufflinks 4.75        
cufflinks 3.101        
cufflinks 1.937       Low
cufflinks 5.083        
cufflinks 5.708       High
cufflinks 3.273        
cufflinks 3.813        
cufflinks 4.067        
cufflinks 3.892        
cufflinks 5.587       High
cufflinks 2.371       Low
cufflinks 3.433        
cufflinks 2.824        
cufflinks 2.209       Low
cufflinks 4.478        
cufflinks 9.457       High
cufflinks 3.141        
cufflinks 3.572        
cufflinks 3.56        
cufflinks 2.66        
cufflinks 2.051       Low
cufflinks 3.143        
cufflinks 3.488        
cufflinks 2.005       Low
cufflinks 7.429       High

0 Strain