Gene : Sobic.002G205600 S. bicolor v3.1.1
Defline:  (1 of 11) PF04484 - Family of unknown function (DUF566) (DUF566) Genomic Order:  2104
Name:  ? Sobic.002G205600 Secondary Identifier:  ? PAC:37953818
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G205600 0.5kb upstream 0.5kb upstream 8016 true Chr02: 59711920-59719935 Sorghum bicolor
Sobic.002G205600 0.5kb upstream 0.5kb upstream 500 false Chr02: 59719436-59719935 Sorghum bicolor
Sobic.002G205600 0.5kb downstream 0.5kb downstream 8016 true Chr02: 59711420-59719435 Sorghum bicolor
Sobic.002G205600 0.5kb downstream 0.5kb downstream 500 false Chr02: 59711420-59711919 Sorghum bicolor
Sobic.002G205600 1.0kb upstream 1.0kb upstream 8516 true Chr02: 59711920-59720435 Sorghum bicolor
Sobic.002G205600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 59719436-59720435 Sorghum bicolor
Sobic.002G205600 1.0kb downstream 1.0kb downstream 8516 true Chr02: 59710920-59719435 Sorghum bicolor
Sobic.002G205600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 59710920-59711919 Sorghum bicolor
Sobic.002G205600 2.0kb upstream 2.0kb upstream 9516 true Chr02: 59711920-59721435 Sorghum bicolor
Sobic.002G205600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 59719436-59721435 Sorghum bicolor
Sobic.002G205600 2.0kb downstream 2.0kb downstream 9516 true Chr02: 59709920-59719435 Sorghum bicolor
Sobic.002G205600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 59709920-59711919 Sorghum bicolor
Sobic.002G205600 5.0kb upstream 5.0kb upstream 12516 true Chr02: 59711920-59724435 Sorghum bicolor
Sobic.002G205600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 59719436-59724435 Sorghum bicolor
Sobic.002G205600 5.0kb downstream 5.0kb downstream 12516 true Chr02: 59706920-59719435 Sorghum bicolor
Sobic.002G205600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 59706920-59711919 Sorghum bicolor
Sobic.002G205600 10.0kb upstream 10.0kb upstream 17516 true Chr02: 59711920-59729435 Sorghum bicolor
Sobic.002G205600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 59719436-59729435 Sorghum bicolor
Sobic.002G205600 10.0kb downstream 10.0kb downstream 17516 true Chr02: 59701920-59719435 Sorghum bicolor
Sobic.002G205600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 59701920-59711919 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176670 5267 Panicoideae View MSA
124572936 5269 Grass View MSA
122050322 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.308       Low
cufflinks 1.036        
cufflinks 1.269        
cufflinks 1.316        
cufflinks 0.784        
cufflinks 0.918        
cufflinks 1.388        
cufflinks 0.628        
cufflinks 0.939        
cufflinks 1.105        
cufflinks 0.958        
cufflinks 1.278        
cufflinks 1.051        
cufflinks 1.146        
cufflinks 1.417        
cufflinks 0.992        
cufflinks 1.349        
cufflinks 1.362        
cufflinks 1.429        
cufflinks 1.168        
cufflinks 1.442        
cufflinks 1.524        
cufflinks 1.363        
cufflinks 1.135        
cufflinks 1.061        
cufflinks 0.802        
cufflinks 2.095       High
cufflinks 0.256       Low
cufflinks 1.889       High
cufflinks 1.358        

0 Strain