Gene : Sobic.002G194900 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR28620//PTHR28620:SF1 - FAMILY NOT NAMED // PROTEIN F25B4.8, ISOFORM A Genomic Order:  1991
Name:  ? Sobic.002G194900 Secondary Identifier:  ? PAC:37950482
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G194900 0.5kb upstream 0.5kb upstream 3597 true Chr02: 58297070-58300666 Sorghum bicolor
Sobic.002G194900 0.5kb upstream 0.5kb upstream 500 false Chr02: 58300167-58300666 Sorghum bicolor
Sobic.002G194900 0.5kb downstream 0.5kb downstream 3597 true Chr02: 58296570-58300166 Sorghum bicolor
Sobic.002G194900 0.5kb downstream 0.5kb downstream 500 false Chr02: 58296570-58297069 Sorghum bicolor
Sobic.002G194900 1.0kb upstream 1.0kb upstream 4097 true Chr02: 58297070-58301166 Sorghum bicolor
Sobic.002G194900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 58300167-58301166 Sorghum bicolor
Sobic.002G194900 1.0kb downstream 1.0kb downstream 4097 true Chr02: 58296070-58300166 Sorghum bicolor
Sobic.002G194900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 58296070-58297069 Sorghum bicolor
Sobic.002G194900 2.0kb upstream 2.0kb upstream 5097 true Chr02: 58297070-58302166 Sorghum bicolor
Sobic.002G194900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 58300167-58302166 Sorghum bicolor
Sobic.002G194900 2.0kb downstream 2.0kb downstream 5097 true Chr02: 58295070-58300166 Sorghum bicolor
Sobic.002G194900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 58295070-58297069 Sorghum bicolor
Sobic.002G194900 5.0kb upstream 5.0kb upstream 8097 true Chr02: 58297070-58305166 Sorghum bicolor
Sobic.002G194900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 58300167-58305166 Sorghum bicolor
Sobic.002G194900 5.0kb downstream 5.0kb downstream 8097 true Chr02: 58292070-58300166 Sorghum bicolor
Sobic.002G194900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 58292070-58297069 Sorghum bicolor
Sobic.002G194900 10.0kb upstream 10.0kb upstream 13097 true Chr02: 58297070-58310166 Sorghum bicolor
Sobic.002G194900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 58300167-58310166 Sorghum bicolor
Sobic.002G194900 10.0kb downstream 10.0kb downstream 13097 true Chr02: 58287070-58300166 Sorghum bicolor
Sobic.002G194900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 58287070-58297069 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175088 5267 Panicoideae View MSA
124589960 5269 Grass View MSA
122046805 5273 Angiosperm View MSA
121351715 5274 Embryophyte View MSA
123426563 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.72       High
cufflinks 0.093       Low
cufflinks 0.098       Low
cufflinks 0.413       High
cufflinks 0.28        
cufflinks 0.473       High
cufflinks 0.135        
cufflinks 0.113        
cufflinks 0.672       High
cufflinks 0.544       High
cufflinks 0.072     Low Low
cufflinks 0.221        
cufflinks 0.338        
cufflinks 0.125        
cufflinks 0.278        
cufflinks 0.094       Low
cufflinks 0.138        
cufflinks 0.151        
cufflinks 0.194        
cufflinks 0.177        
cufflinks 0.606       High
cufflinks 0.144        
cufflinks 0.079     Low Low
cufflinks 0.064     Low Low
cufflinks 0.158        
cufflinks 0.069       Low
cufflinks 0.157        
cufflinks 0.766       High
cufflinks 0.192        
cufflinks 0.308        

0 Strain