Gene : Sobic.002G197200 S. bicolor v3.1.1
Defline:  (1 of 2) PF10263 - SprT-like family (SprT-like) Genomic Order:  2015
Name:  ? Sobic.002G197200 Secondary Identifier:  ? PAC:37953438
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G197200 0.5kb upstream 0.5kb upstream 5710 true Chr02: 58656226-58661935 Sorghum bicolor
Sobic.002G197200 0.5kb upstream 0.5kb upstream 500 false Chr02: 58661436-58661935 Sorghum bicolor
Sobic.002G197200 0.5kb downstream 0.5kb downstream 5710 true Chr02: 58655726-58661435 Sorghum bicolor
Sobic.002G197200 0.5kb downstream 0.5kb downstream 500 false Chr02: 58655726-58656225 Sorghum bicolor
Sobic.002G197200 1.0kb upstream 1.0kb upstream 6210 true Chr02: 58656226-58662435 Sorghum bicolor
Sobic.002G197200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 58661436-58662435 Sorghum bicolor
Sobic.002G197200 1.0kb downstream 1.0kb downstream 6210 true Chr02: 58655226-58661435 Sorghum bicolor
Sobic.002G197200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 58655226-58656225 Sorghum bicolor
Sobic.002G197200 2.0kb upstream 2.0kb upstream 7210 true Chr02: 58656226-58663435 Sorghum bicolor
Sobic.002G197200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 58661436-58663435 Sorghum bicolor
Sobic.002G197200 2.0kb downstream 2.0kb downstream 7210 true Chr02: 58654226-58661435 Sorghum bicolor
Sobic.002G197200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 58654226-58656225 Sorghum bicolor
Sobic.002G197200 5.0kb upstream 5.0kb upstream 10210 true Chr02: 58656226-58666435 Sorghum bicolor
Sobic.002G197200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 58661436-58666435 Sorghum bicolor
Sobic.002G197200 5.0kb downstream 5.0kb downstream 10210 true Chr02: 58651226-58661435 Sorghum bicolor
Sobic.002G197200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 58651226-58656225 Sorghum bicolor
Sobic.002G197200 10.0kb upstream 10.0kb upstream 15210 true Chr02: 58656226-58671435 Sorghum bicolor
Sobic.002G197200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 58661436-58671435 Sorghum bicolor
Sobic.002G197200 10.0kb downstream 10.0kb downstream 15210 true Chr02: 58646226-58661435 Sorghum bicolor
Sobic.002G197200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 58646226-58656225 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122005800 5273 Angiosperm View MSA
122194601 5267 Panicoideae View MSA
124579452 5269 Grass View MSA
121275938 5274 Embryophyte View MSA
123426815 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.199        
cufflinks 0.754        
cufflinks 1.708        
cufflinks 1.297        
cufflinks 3.876       High
cufflinks 0.644        
cufflinks 0.869        
cufflinks 0.421        
cufflinks 3.128       High
cufflinks 4.63       High
cufflinks 0.24       Low
cufflinks 0.351        
cufflinks 3.667       High
cufflinks 0.229       Low
cufflinks 4.986       High
cufflinks 1.318        
cufflinks 0.954        
cufflinks 0.785        
cufflinks 0.549        
cufflinks 0.962        
cufflinks 4.2       High
cufflinks 0.127       Low
cufflinks 0.275       Low
cufflinks 0.2       Low
cufflinks 1.062        
cufflinks 0.747        
cufflinks 0.63        
cufflinks 1.312        
cufflinks 0.77        
cufflinks 7.384       High

0 Strain