Gene : Sobic.002G189600 S. bicolor v3.1.1
Defline:  (1 of 5) PF11833 - Protein of unknown function (DUF3353) (DUF3353) Genomic Order:  1938
Name:  ? Sobic.002G189600 Secondary Identifier:  ? PAC:37951296
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G189600 0.5kb upstream 0.5kb upstream 2964 true Chr02: 57561624-57564587 Sorghum bicolor
Sobic.002G189600 0.5kb upstream 0.5kb upstream 500 false Chr02: 57561624-57562123 Sorghum bicolor
Sobic.002G189600 0.5kb downstream 0.5kb downstream 2964 true Chr02: 57562124-57565087 Sorghum bicolor
Sobic.002G189600 0.5kb downstream 0.5kb downstream 500 false Chr02: 57564588-57565087 Sorghum bicolor
Sobic.002G189600 1.0kb upstream 1.0kb upstream 3464 true Chr02: 57561124-57564587 Sorghum bicolor
Sobic.002G189600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 57561124-57562123 Sorghum bicolor
Sobic.002G189600 1.0kb downstream 1.0kb downstream 3464 true Chr02: 57562124-57565587 Sorghum bicolor
Sobic.002G189600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 57564588-57565587 Sorghum bicolor
Sobic.002G189600 2.0kb upstream 2.0kb upstream 4464 true Chr02: 57560124-57564587 Sorghum bicolor
Sobic.002G189600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 57560124-57562123 Sorghum bicolor
Sobic.002G189600 2.0kb downstream 2.0kb downstream 4464 true Chr02: 57562124-57566587 Sorghum bicolor
Sobic.002G189600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 57564588-57566587 Sorghum bicolor
Sobic.002G189600 5.0kb upstream 5.0kb upstream 7464 true Chr02: 57557124-57564587 Sorghum bicolor
Sobic.002G189600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 57557124-57562123 Sorghum bicolor
Sobic.002G189600 5.0kb downstream 5.0kb downstream 7464 true Chr02: 57562124-57569587 Sorghum bicolor
Sobic.002G189600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 57564588-57569587 Sorghum bicolor
Sobic.002G189600 10.0kb upstream 10.0kb upstream 12464 true Chr02: 57552124-57564587 Sorghum bicolor
Sobic.002G189600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 57552124-57562123 Sorghum bicolor
Sobic.002G189600 10.0kb downstream 10.0kb downstream 12464 true Chr02: 57562124-57574587 Sorghum bicolor
Sobic.002G189600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 57564588-57574587 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122197781 5267 Panicoideae View MSA
124577363 5269 Grass View MSA
122050900 5273 Angiosperm View MSA
121343809 5274 Embryophyte View MSA
123427732 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.195       High
cufflinks 1.421       Low
cufflinks 5.183        
cufflinks 4.742        
cufflinks 6.102        
cufflinks 7.528        
cufflinks 7.571        
cufflinks 7.673        
cufflinks 4.486        
cufflinks 4.037        
cufflinks 4.366        
cufflinks 3.508        
cufflinks 4.121        
cufflinks 4.255        
cufflinks 6.088        
cufflinks 2.97        
cufflinks 7.657        
cufflinks 9.71       High
cufflinks 4.702        
cufflinks 4.572        
cufflinks 7.208        
cufflinks 4.67        
cufflinks 4.663        
cufflinks 4.997        
cufflinks 1.223       Low
cufflinks 1.099       Low
cufflinks 2.946        
cufflinks 4.743        
cufflinks 26.754     High High
cufflinks 6.127        

0 Strain