Gene : Sobic.002G184600 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10788//PTHR10788:SF19 - TREHALOSE-6-PHOSPHATE SYNTHASE // TREHALOSE-PHOSPHATE PHOSPHATASE E-RELATED Genomic Order:  1886
Name:  ? Sobic.002G184600 Secondary Identifier:  ? PAC:37952247
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G184600 0.5kb upstream 0.5kb upstream 2870 true Chr02: 56855771-56858640 Sorghum bicolor
Sobic.002G184600 0.5kb upstream 0.5kb upstream 500 false Chr02: 56855771-56856270 Sorghum bicolor
Sobic.002G184600 0.5kb downstream 0.5kb downstream 2870 true Chr02: 56856271-56859140 Sorghum bicolor
Sobic.002G184600 0.5kb downstream 0.5kb downstream 500 false Chr02: 56858641-56859140 Sorghum bicolor
Sobic.002G184600 1.0kb upstream 1.0kb upstream 3370 true Chr02: 56855271-56858640 Sorghum bicolor
Sobic.002G184600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 56855271-56856270 Sorghum bicolor
Sobic.002G184600 1.0kb downstream 1.0kb downstream 3370 true Chr02: 56856271-56859640 Sorghum bicolor
Sobic.002G184600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 56858641-56859640 Sorghum bicolor
Sobic.002G184600 2.0kb upstream 2.0kb upstream 4370 true Chr02: 56854271-56858640 Sorghum bicolor
Sobic.002G184600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 56854271-56856270 Sorghum bicolor
Sobic.002G184600 2.0kb downstream 2.0kb downstream 4370 true Chr02: 56856271-56860640 Sorghum bicolor
Sobic.002G184600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 56858641-56860640 Sorghum bicolor
Sobic.002G184600 5.0kb upstream 5.0kb upstream 7370 true Chr02: 56851271-56858640 Sorghum bicolor
Sobic.002G184600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 56851271-56856270 Sorghum bicolor
Sobic.002G184600 5.0kb downstream 5.0kb downstream 7370 true Chr02: 56856271-56863640 Sorghum bicolor
Sobic.002G184600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 56858641-56863640 Sorghum bicolor
Sobic.002G184600 10.0kb upstream 10.0kb upstream 12370 true Chr02: 56846271-56858640 Sorghum bicolor
Sobic.002G184600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 56846271-56856270 Sorghum bicolor
Sobic.002G184600 10.0kb downstream 10.0kb downstream 12370 true Chr02: 56856271-56868640 Sorghum bicolor
Sobic.002G184600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 56858641-56868640 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176205 5267 Panicoideae View MSA
124576786 5269 Grass View MSA
122042129 5273 Angiosperm View MSA
121351669 5274 Embryophyte View MSA
123427869 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.458     High  
cufflinks 21.608     High  
cufflinks 327.826     High High
cufflinks 629.511     High High
cufflinks 150.496     High High
cufflinks 265.051     High High
cufflinks 2.94       Low
cufflinks 10.128     High  
cufflinks 40.06     High  
cufflinks 49.84     High  
cufflinks 45.529     High  
cufflinks 2.294       Low
cufflinks 54.643     High  
cufflinks 7.589        
cufflinks 140.579     High  
cufflinks 27.423     High  
cufflinks 3.316       Low
cufflinks 2.341       Low
cufflinks 94.892     High  
cufflinks 2.594       Low
cufflinks 7.806        
cufflinks 10.486        
cufflinks 0.616       Low
cufflinks 0.48       Low
cufflinks 20.035     High  
cufflinks 21.395     High  
cufflinks 107.96     High  
cufflinks 5.96        
cufflinks 3.223       Low
cufflinks 114.687     High  

0 Strain