Gene : Sobic.002G185100 S. bicolor v3.1.1
Defline:  (1 of 2) K00235 - succinate dehydrogenase (ubiquinone) iron-sulfur subunit (SDHB, SDH2) Genomic Order:  1891
Name:  ? Sobic.002G185100 Secondary Identifier:  ? PAC:37953377
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-3781 Sorghum bicolor pathologic  
Sbicolor PWY-4302 Sorghum bicolor pathologic  
Sbicolor PWY-5464 Sorghum bicolor pathologic  
Sbicolor PWY-561 Sorghum bicolor pathologic  
Sbicolor PWY-5690 Sorghum bicolor pathologic  
Sbicolor PWY-7279 Sorghum bicolor pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G185100 0.5kb upstream 0.5kb upstream 1442 true Chr02: 56916507-56917948 Sorghum bicolor
Sobic.002G185100 0.5kb upstream 0.5kb upstream 500 false Chr02: 56917449-56917948 Sorghum bicolor
Sobic.002G185100 0.5kb downstream 0.5kb downstream 1442 true Chr02: 56916007-56917448 Sorghum bicolor
Sobic.002G185100 0.5kb downstream 0.5kb downstream 500 false Chr02: 56916007-56916506 Sorghum bicolor
Sobic.002G185100 1.0kb upstream 1.0kb upstream 1942 true Chr02: 56916507-56918448 Sorghum bicolor
Sobic.002G185100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 56917449-56918448 Sorghum bicolor
Sobic.002G185100 1.0kb downstream 1.0kb downstream 1942 true Chr02: 56915507-56917448 Sorghum bicolor
Sobic.002G185100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 56915507-56916506 Sorghum bicolor
Sobic.002G185100 2.0kb upstream 2.0kb upstream 2942 true Chr02: 56916507-56919448 Sorghum bicolor
Sobic.002G185100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 56917449-56919448 Sorghum bicolor
Sobic.002G185100 2.0kb downstream 2.0kb downstream 2942 true Chr02: 56914507-56917448 Sorghum bicolor
Sobic.002G185100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 56914507-56916506 Sorghum bicolor
Sobic.002G185100 5.0kb upstream 5.0kb upstream 5942 true Chr02: 56916507-56922448 Sorghum bicolor
Sobic.002G185100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 56917449-56922448 Sorghum bicolor
Sobic.002G185100 5.0kb downstream 5.0kb downstream 5942 true Chr02: 56911507-56917448 Sorghum bicolor
Sobic.002G185100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 56911507-56916506 Sorghum bicolor
Sobic.002G185100 10.0kb upstream 10.0kb upstream 10942 true Chr02: 56916507-56927448 Sorghum bicolor
Sobic.002G185100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 56917449-56927448 Sorghum bicolor
Sobic.002G185100 10.0kb downstream 10.0kb downstream 10942 true Chr02: 56906507-56917448 Sorghum bicolor
Sobic.002G185100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 56906507-56916506 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190340 5267 Panicoideae View MSA
124581738 5269 Grass View MSA
122049105 5273 Angiosperm View MSA
121351479 5274 Embryophyte View MSA
123424532 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.388        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.055     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 326.259     High High
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain