Gene : Sobic.002G184900 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12151//PTHR12151:SF1 - SCO1/SENC // PROTEIN SCO1 HOMOLOG 2, MITOCHONDRIAL Genomic Order:  1889
Name:  ? Sobic.002G184900 Secondary Identifier:  ? PAC:37951643
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G184900 0.5kb upstream 0.5kb upstream 4950 true Chr02: 56906953-56911902 Sorghum bicolor
Sobic.002G184900 0.5kb upstream 0.5kb upstream 500 false Chr02: 56911403-56911902 Sorghum bicolor
Sobic.002G184900 0.5kb downstream 0.5kb downstream 4950 true Chr02: 56906453-56911402 Sorghum bicolor
Sobic.002G184900 0.5kb downstream 0.5kb downstream 500 false Chr02: 56906453-56906952 Sorghum bicolor
Sobic.002G184900 1.0kb upstream 1.0kb upstream 5450 true Chr02: 56906953-56912402 Sorghum bicolor
Sobic.002G184900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 56911403-56912402 Sorghum bicolor
Sobic.002G184900 1.0kb downstream 1.0kb downstream 5450 true Chr02: 56905953-56911402 Sorghum bicolor
Sobic.002G184900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 56905953-56906952 Sorghum bicolor
Sobic.002G184900 2.0kb upstream 2.0kb upstream 6450 true Chr02: 56906953-56913402 Sorghum bicolor
Sobic.002G184900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 56911403-56913402 Sorghum bicolor
Sobic.002G184900 2.0kb downstream 2.0kb downstream 6450 true Chr02: 56904953-56911402 Sorghum bicolor
Sobic.002G184900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 56904953-56906952 Sorghum bicolor
Sobic.002G184900 5.0kb upstream 5.0kb upstream 9450 true Chr02: 56906953-56916402 Sorghum bicolor
Sobic.002G184900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 56911403-56916402 Sorghum bicolor
Sobic.002G184900 5.0kb downstream 5.0kb downstream 9450 true Chr02: 56901953-56911402 Sorghum bicolor
Sobic.002G184900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 56901953-56906952 Sorghum bicolor
Sobic.002G184900 10.0kb upstream 10.0kb upstream 14450 true Chr02: 56906953-56921402 Sorghum bicolor
Sobic.002G184900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 56911403-56921402 Sorghum bicolor
Sobic.002G184900 10.0kb downstream 10.0kb downstream 14450 true Chr02: 56896953-56911402 Sorghum bicolor
Sobic.002G184900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 56896953-56906952 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189550 5267 Panicoideae View MSA
124579872 5269 Grass View MSA
122046621 5273 Angiosperm View MSA
121343822 5274 Embryophyte View MSA
123427619 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.621       High
cufflinks 0.467       Low
cufflinks 1.224        
cufflinks 1.565        
cufflinks 2.122        
cufflinks 1.339        
cufflinks 2.203        
cufflinks 1.079       Low
cufflinks 1.451        
cufflinks 1.78        
cufflinks 2.32        
cufflinks 2.838        
cufflinks 1.456        
cufflinks 4.061       High
cufflinks 1.424        
cufflinks 2.199        
cufflinks 2.085        
cufflinks 2.479        
cufflinks 0.938       Low
cufflinks 1.669        
cufflinks 2.919        
cufflinks 2.682        
cufflinks 3.337       High
cufflinks 3.661       High
cufflinks 0.56       Low
cufflinks 0.51       Low
cufflinks 2.666        
cufflinks 1.228        
cufflinks 2.281        
cufflinks 2.125        

0 Strain