Gene : Sobic.002G183300 S. bicolor v3.1.1
Defline:  (1 of 3) 1.14.13.39 - Nitric-oxide synthase (NADPH) / NO synthase Genomic Order:  1873
Name:  ? Sobic.002G183300 Secondary Identifier:  ? PAC:37950031
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-6845 Sorghum bicolor pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G183300 0.5kb upstream 0.5kb upstream 3435 true Chr02: 56559063-56562497 Sorghum bicolor
Sobic.002G183300 0.5kb upstream 0.5kb upstream 500 false Chr02: 56559063-56559562 Sorghum bicolor
Sobic.002G183300 0.5kb downstream 0.5kb downstream 3435 true Chr02: 56559563-56562997 Sorghum bicolor
Sobic.002G183300 0.5kb downstream 0.5kb downstream 500 false Chr02: 56562498-56562997 Sorghum bicolor
Sobic.002G183300 1.0kb upstream 1.0kb upstream 3935 true Chr02: 56558563-56562497 Sorghum bicolor
Sobic.002G183300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 56558563-56559562 Sorghum bicolor
Sobic.002G183300 1.0kb downstream 1.0kb downstream 3935 true Chr02: 56559563-56563497 Sorghum bicolor
Sobic.002G183300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 56562498-56563497 Sorghum bicolor
Sobic.002G183300 2.0kb upstream 2.0kb upstream 4935 true Chr02: 56557563-56562497 Sorghum bicolor
Sobic.002G183300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 56557563-56559562 Sorghum bicolor
Sobic.002G183300 2.0kb downstream 2.0kb downstream 4935 true Chr02: 56559563-56564497 Sorghum bicolor
Sobic.002G183300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 56562498-56564497 Sorghum bicolor
Sobic.002G183300 5.0kb upstream 5.0kb upstream 7935 true Chr02: 56554563-56562497 Sorghum bicolor
Sobic.002G183300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 56554563-56559562 Sorghum bicolor
Sobic.002G183300 5.0kb downstream 5.0kb downstream 7935 true Chr02: 56559563-56567497 Sorghum bicolor
Sobic.002G183300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 56562498-56567497 Sorghum bicolor
Sobic.002G183300 10.0kb upstream 10.0kb upstream 12935 true Chr02: 56549563-56562497 Sorghum bicolor
Sobic.002G183300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 56549563-56559562 Sorghum bicolor
Sobic.002G183300 10.0kb downstream 10.0kb downstream 12935 true Chr02: 56559563-56572497 Sorghum bicolor
Sobic.002G183300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 56562498-56572497 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176672 5267 Panicoideae View MSA
124574082 5269 Grass View MSA
122042664 5273 Angiosperm View MSA
121347878 5274 Embryophyte View MSA
123426230 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.166       High
cufflinks 0.095       Low
cufflinks 0.227       Low
cufflinks 0.773        
cufflinks 1.954        
cufflinks 1.149        
cufflinks 0.682        
cufflinks 0.091       Low
cufflinks 2.43        
cufflinks 2.546        
cufflinks 1.45        
cufflinks 1.768        
cufflinks 0.753        
cufflinks 1.465        
cufflinks 0.715        
cufflinks 0.243       Low
cufflinks 0.637        
cufflinks 0.587        
cufflinks 0.165       Low
cufflinks 0.627        
cufflinks 3.863       High
cufflinks 2.256        
cufflinks 1.87        
cufflinks 1.853        
cufflinks 0.113       Low
cufflinks 0.062       Low
cufflinks 1.056        
cufflinks 7.348       High
cufflinks 0.299        
cufflinks 1.273        

0 Strain