Gene : Sobic.006G037700 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10285:SF53 - URIDINE KINASE Genomic Order:  399
Name:  ? Sobic.006G037700 Secondary Identifier:  ? PAC:37946673
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-7193 Sorghum bicolor pathologic  
Sbicolor PWY-7196 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G037700 0.5kb upstream 0.5kb upstream 61459 true Chr06: 14487572-14549030 Sorghum bicolor
Sobic.006G037700 0.5kb upstream 0.5kb upstream 500 false Chr06: 14548531-14549030 Sorghum bicolor
Sobic.006G037700 0.5kb downstream 0.5kb downstream 61459 true Chr06: 14487072-14548530 Sorghum bicolor
Sobic.006G037700 0.5kb downstream 0.5kb downstream 500 false Chr06: 14487072-14487571 Sorghum bicolor
Sobic.006G037700 1.0kb upstream 1.0kb upstream 61959 true Chr06: 14487572-14549530 Sorghum bicolor
Sobic.006G037700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 14548531-14549530 Sorghum bicolor
Sobic.006G037700 1.0kb downstream 1.0kb downstream 61959 true Chr06: 14486572-14548530 Sorghum bicolor
Sobic.006G037700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 14486572-14487571 Sorghum bicolor
Sobic.006G037700 2.0kb upstream 2.0kb upstream 62959 true Chr06: 14487572-14550530 Sorghum bicolor
Sobic.006G037700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 14548531-14550530 Sorghum bicolor
Sobic.006G037700 2.0kb downstream 2.0kb downstream 62959 true Chr06: 14485572-14548530 Sorghum bicolor
Sobic.006G037700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 14485572-14487571 Sorghum bicolor
Sobic.006G037700 5.0kb upstream 5.0kb upstream 65959 true Chr06: 14487572-14553530 Sorghum bicolor
Sobic.006G037700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 14548531-14553530 Sorghum bicolor
Sobic.006G037700 5.0kb downstream 5.0kb downstream 65959 true Chr06: 14482572-14548530 Sorghum bicolor
Sobic.006G037700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 14482572-14487571 Sorghum bicolor
Sobic.006G037700 10.0kb upstream 10.0kb upstream 70959 true Chr06: 14487572-14558530 Sorghum bicolor
Sobic.006G037700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 14548531-14558530 Sorghum bicolor
Sobic.006G037700 10.0kb downstream 10.0kb downstream 70959 true Chr06: 14477572-14548530 Sorghum bicolor
Sobic.006G037700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14477572-14487571 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184913 5267 Panicoideae View MSA
124588331 5269 Grass View MSA
122044880 5273 Angiosperm View MSA
121351427 5274 Embryophyte View MSA
123427517 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.219       Low
cufflinks 0.263       Low
cufflinks 0.588        
cufflinks 0.737        
cufflinks 0.817        
cufflinks 0.804        
cufflinks 0.375        
cufflinks 0.323       Low
cufflinks 1.0       High
cufflinks 1.07       High
cufflinks 0.895       High
cufflinks 0.983       High
cufflinks 0.768        
cufflinks 0.752        
cufflinks 0.683        
cufflinks 0.366       Low
cufflinks 0.308       Low
cufflinks 0.383        
cufflinks 0.438        
cufflinks 0.456        
cufflinks 0.794        
cufflinks 0.691        
cufflinks 0.734        
cufflinks 0.742        
cufflinks 0.5        
cufflinks 0.255       Low
cufflinks 0.928       High
cufflinks 0.187       Low
cufflinks 0.434        
cufflinks 0.789        

0 Strain