Gene : Sobic.002G179300 S. bicolor v3.1.1
Defline:  (1 of 4) K02917 - large subunit ribosomal protein L35Ae (RP-L35Ae, RPL35A) Genomic Order:  1831
Name:  ? Sobic.002G179300 Secondary Identifier:  ? PAC:37953140
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G179300 0.5kb upstream 0.5kb upstream 2532 true Chr02: 56045140-56047671 Sorghum bicolor
Sobic.002G179300 0.5kb upstream 0.5kb upstream 500 false Chr02: 56047172-56047671 Sorghum bicolor
Sobic.002G179300 0.5kb downstream 0.5kb downstream 2532 true Chr02: 56044640-56047171 Sorghum bicolor
Sobic.002G179300 0.5kb downstream 0.5kb downstream 500 false Chr02: 56044640-56045139 Sorghum bicolor
Sobic.002G179300 1.0kb upstream 1.0kb upstream 3032 true Chr02: 56045140-56048171 Sorghum bicolor
Sobic.002G179300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 56047172-56048171 Sorghum bicolor
Sobic.002G179300 1.0kb downstream 1.0kb downstream 3032 true Chr02: 56044140-56047171 Sorghum bicolor
Sobic.002G179300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 56044140-56045139 Sorghum bicolor
Sobic.002G179300 2.0kb upstream 2.0kb upstream 4032 true Chr02: 56045140-56049171 Sorghum bicolor
Sobic.002G179300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 56047172-56049171 Sorghum bicolor
Sobic.002G179300 2.0kb downstream 2.0kb downstream 4032 true Chr02: 56043140-56047171 Sorghum bicolor
Sobic.002G179300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 56043140-56045139 Sorghum bicolor
Sobic.002G179300 5.0kb upstream 5.0kb upstream 7032 true Chr02: 56045140-56052171 Sorghum bicolor
Sobic.002G179300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 56047172-56052171 Sorghum bicolor
Sobic.002G179300 5.0kb downstream 5.0kb downstream 7032 true Chr02: 56040140-56047171 Sorghum bicolor
Sobic.002G179300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 56040140-56045139 Sorghum bicolor
Sobic.002G179300 10.0kb upstream 10.0kb upstream 12032 true Chr02: 56045140-56057171 Sorghum bicolor
Sobic.002G179300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 56047172-56057171 Sorghum bicolor
Sobic.002G179300 10.0kb downstream 10.0kb downstream 12032 true Chr02: 56035140-56047171 Sorghum bicolor
Sobic.002G179300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 56035140-56045139 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122197702 5267 Panicoideae View MSA
124589102 5269 Grass View MSA
122043317 5273 Angiosperm View MSA
121349974 5274 Embryophyte View MSA
123428152 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 164.612     High High
cufflinks 2.972       Low
cufflinks 13.457     High  
cufflinks 31.717     High  
cufflinks 33.333     High  
cufflinks 20.389     High  
cufflinks 40.227     High  
cufflinks 7.901       Low
cufflinks 27.991     High  
cufflinks 26.781     High  
cufflinks 51.429     High  
cufflinks 39.433     High  
cufflinks 18.141     High  
cufflinks 51.283     High  
cufflinks 24.711     High  
cufflinks 12.473     High Low
cufflinks 43.368     High  
cufflinks 41.553     High  
cufflinks 14.529     High  
cufflinks 38.351     High  
cufflinks 66.976     High  
cufflinks 77.262     High High
cufflinks 53.978     High  
cufflinks 71.612     High  
cufflinks 5.665       Low
cufflinks 2.106       Low
cufflinks 34.483     High  
cufflinks 64.897     High  
cufflinks 34.24     High  
cufflinks 34.852     High  

0 Strain