Gene : Sobic.002G174900 S. bicolor v3.1.1
Defline:  (1 of 1) 2.8.1.6//2.8.1.7 - Biotin synthase // Cysteine desulfurase / Cysteine desulfurylase Genomic Order:  1785
Name:  ? Sobic.002G174900 Secondary Identifier:  ? PAC:37952614
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY0-1021 Sorghum bicolor pathologic  
Sbicolor PWY0-1507 Sorghum bicolor pathologic  
Sbicolor PWY-6823 Sorghum bicolor pathologic  
Sbicolor PWY-7250 Sorghum bicolor pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G174900 0.5kb upstream 0.5kb upstream 5824 true Chr02: 55352862-55358685 Sorghum bicolor
Sobic.002G174900 0.5kb upstream 0.5kb upstream 500 false Chr02: 55358186-55358685 Sorghum bicolor
Sobic.002G174900 0.5kb downstream 0.5kb downstream 5824 true Chr02: 55352362-55358185 Sorghum bicolor
Sobic.002G174900 0.5kb downstream 0.5kb downstream 500 false Chr02: 55352362-55352861 Sorghum bicolor
Sobic.002G174900 1.0kb upstream 1.0kb upstream 6324 true Chr02: 55352862-55359185 Sorghum bicolor
Sobic.002G174900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 55358186-55359185 Sorghum bicolor
Sobic.002G174900 1.0kb downstream 1.0kb downstream 6324 true Chr02: 55351862-55358185 Sorghum bicolor
Sobic.002G174900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 55351862-55352861 Sorghum bicolor
Sobic.002G174900 2.0kb upstream 2.0kb upstream 7324 true Chr02: 55352862-55360185 Sorghum bicolor
Sobic.002G174900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 55358186-55360185 Sorghum bicolor
Sobic.002G174900 2.0kb downstream 2.0kb downstream 7324 true Chr02: 55350862-55358185 Sorghum bicolor
Sobic.002G174900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 55350862-55352861 Sorghum bicolor
Sobic.002G174900 5.0kb upstream 5.0kb upstream 10324 true Chr02: 55352862-55363185 Sorghum bicolor
Sobic.002G174900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 55358186-55363185 Sorghum bicolor
Sobic.002G174900 5.0kb downstream 5.0kb downstream 10324 true Chr02: 55347862-55358185 Sorghum bicolor
Sobic.002G174900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 55347862-55352861 Sorghum bicolor
Sobic.002G174900 10.0kb upstream 10.0kb upstream 15324 true Chr02: 55352862-55368185 Sorghum bicolor
Sobic.002G174900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 55358186-55368185 Sorghum bicolor
Sobic.002G174900 10.0kb downstream 10.0kb downstream 15324 true Chr02: 55342862-55358185 Sorghum bicolor
Sobic.002G174900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 55342862-55352861 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194160 5267 Panicoideae View MSA
124572398 5269 Grass View MSA
122047383 5273 Angiosperm View MSA
121345399 5274 Embryophyte View MSA
123425014 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.245       High
cufflinks 0.812       Low
cufflinks 1.62        
cufflinks 5.326       High
cufflinks 3.21        
cufflinks 3.809        
cufflinks 1.403       Low
cufflinks 1.619        
cufflinks 3.488        
cufflinks 3.736        
cufflinks 2.522        
cufflinks 2.123        
cufflinks 3.421        
cufflinks 2.177        
cufflinks 3.666        
cufflinks 2.251        
cufflinks 1.336       Low
cufflinks 1.238       Low
cufflinks 2.125        
cufflinks 1.468        
cufflinks 4.083        
cufflinks 2.36        
cufflinks 2.371        
cufflinks 2.384        
cufflinks 1.494        
cufflinks 0.874       Low
cufflinks 2.391        
cufflinks 22.824     High High
cufflinks 1.933        
cufflinks 3.715        

0 Strain