Gene : Sobic.002G175400 S. bicolor v3.1.1
Defline:  (1 of 1) 1.14.19.3 - Acyl-CoA 6-desaturase / Long-chain fatty acid Delta(6)-desaturase Genomic Order:  1791
Name:  ? Sobic.002G175400 Secondary Identifier:  ? PAC:37954932
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-7606 Sorghum bicolor pathologic  
Sbicolor PWY-7726 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G175400 0.5kb upstream 0.5kb upstream 3947 true Chr02: 55392386-55396332 Sorghum bicolor
Sobic.002G175400 0.5kb upstream 0.5kb upstream 500 false Chr02: 55392386-55392885 Sorghum bicolor
Sobic.002G175400 0.5kb downstream 0.5kb downstream 3947 true Chr02: 55392886-55396832 Sorghum bicolor
Sobic.002G175400 0.5kb downstream 0.5kb downstream 500 false Chr02: 55396333-55396832 Sorghum bicolor
Sobic.002G175400 1.0kb upstream 1.0kb upstream 4447 true Chr02: 55391886-55396332 Sorghum bicolor
Sobic.002G175400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 55391886-55392885 Sorghum bicolor
Sobic.002G175400 1.0kb downstream 1.0kb downstream 4447 true Chr02: 55392886-55397332 Sorghum bicolor
Sobic.002G175400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 55396333-55397332 Sorghum bicolor
Sobic.002G175400 2.0kb upstream 2.0kb upstream 5447 true Chr02: 55390886-55396332 Sorghum bicolor
Sobic.002G175400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 55390886-55392885 Sorghum bicolor
Sobic.002G175400 2.0kb downstream 2.0kb downstream 5447 true Chr02: 55392886-55398332 Sorghum bicolor
Sobic.002G175400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 55396333-55398332 Sorghum bicolor
Sobic.002G175400 5.0kb upstream 5.0kb upstream 8447 true Chr02: 55387886-55396332 Sorghum bicolor
Sobic.002G175400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 55387886-55392885 Sorghum bicolor
Sobic.002G175400 5.0kb downstream 5.0kb downstream 8447 true Chr02: 55392886-55401332 Sorghum bicolor
Sobic.002G175400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 55396333-55401332 Sorghum bicolor
Sobic.002G175400 10.0kb upstream 10.0kb upstream 13447 true Chr02: 55382886-55396332 Sorghum bicolor
Sobic.002G175400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 55382886-55392885 Sorghum bicolor
Sobic.002G175400 10.0kb downstream 10.0kb downstream 13447 true Chr02: 55392886-55406332 Sorghum bicolor
Sobic.002G175400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 55396333-55406332 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047499 5273 Angiosperm View MSA
122199895 5267 Panicoideae View MSA
124575823 5269 Grass View MSA
121347259 5274 Embryophyte View MSA
123427370 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.211     High  
cufflinks 7.194     High  
cufflinks 2.382       Low
cufflinks 1.205       Low
cufflinks 34.586     High High
cufflinks 1.709       Low
cufflinks 26.73     High  
cufflinks 21.386     High  
cufflinks 2.826       Low
cufflinks 5.557        
cufflinks 12.606     High  
cufflinks 14.488     High  
cufflinks 9.115        
cufflinks 16.96     High  
cufflinks 22.95     High  
cufflinks 3.033       Low
cufflinks 24.937     High  
cufflinks 23.673     High  
cufflinks 8.407        
cufflinks 15.793     High  
cufflinks 12.29        
cufflinks 25.893     High  
cufflinks 18.715     High  
cufflinks 21.634     High  
cufflinks 2.944       Low
cufflinks 11.662     High  
cufflinks 3.821        
cufflinks 0.19       Low
cufflinks 48.766     High High
cufflinks 18.283     High  

0 Strain