Gene : Sobic.002G172401 S. bicolor v3.1.1
Defline:  (1 of 16) K07904 - Ras-related protein Rab-11A (RAB11A) Genomic Order:  1760
Name:  ? Sobic.002G172401 Secondary Identifier:  ? PAC:37949925
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G172401 0.5kb upstream 0.5kb upstream 2681 true Chr02: 54560001-54562681 Sorghum bicolor
Sobic.002G172401 0.5kb upstream 0.5kb upstream 500 false Chr02: 54562182-54562681 Sorghum bicolor
Sobic.002G172401 0.5kb downstream 0.5kb downstream 2681 true Chr02: 54559501-54562181 Sorghum bicolor
Sobic.002G172401 0.5kb downstream 0.5kb downstream 500 false Chr02: 54559501-54560000 Sorghum bicolor
Sobic.002G172401 1.0kb upstream 1.0kb upstream 3181 true Chr02: 54560001-54563181 Sorghum bicolor
Sobic.002G172401 1.0kb upstream 1.0kb upstream 1000 false Chr02: 54562182-54563181 Sorghum bicolor
Sobic.002G172401 1.0kb downstream 1.0kb downstream 3181 true Chr02: 54559001-54562181 Sorghum bicolor
Sobic.002G172401 1.0kb downstream 1.0kb downstream 1000 false Chr02: 54559001-54560000 Sorghum bicolor
Sobic.002G172401 2.0kb upstream 2.0kb upstream 4181 true Chr02: 54560001-54564181 Sorghum bicolor
Sobic.002G172401 2.0kb upstream 2.0kb upstream 2000 false Chr02: 54562182-54564181 Sorghum bicolor
Sobic.002G172401 2.0kb downstream 2.0kb downstream 4181 true Chr02: 54558001-54562181 Sorghum bicolor
Sobic.002G172401 2.0kb downstream 2.0kb downstream 2000 false Chr02: 54558001-54560000 Sorghum bicolor
Sobic.002G172401 5.0kb upstream 5.0kb upstream 7181 true Chr02: 54560001-54567181 Sorghum bicolor
Sobic.002G172401 5.0kb upstream 5.0kb upstream 5000 false Chr02: 54562182-54567181 Sorghum bicolor
Sobic.002G172401 5.0kb downstream 5.0kb downstream 7181 true Chr02: 54555001-54562181 Sorghum bicolor
Sobic.002G172401 5.0kb downstream 5.0kb downstream 5000 false Chr02: 54555001-54560000 Sorghum bicolor
Sobic.002G172401 10.0kb upstream 10.0kb upstream 12181 true Chr02: 54560001-54572181 Sorghum bicolor
Sobic.002G172401 10.0kb upstream 10.0kb upstream 10000 false Chr02: 54562182-54572181 Sorghum bicolor
Sobic.002G172401 10.0kb downstream 10.0kb downstream 12181 true Chr02: 54550001-54562181 Sorghum bicolor
Sobic.002G172401 10.0kb downstream 10.0kb downstream 10000 false Chr02: 54550001-54560000 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193112 5267 Panicoideae View MSA
124587924 5269 Grass View MSA
122042184 5273 Angiosperm View MSA
121351595 5274 Embryophyte View MSA
123426852 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.222        
cufflinks 1.171       Low
cufflinks 3.016        
cufflinks 2.459        
cufflinks 16.103     High High
cufflinks 3.981        
cufflinks 6.556        
cufflinks 1.465       Low
cufflinks 2.552        
cufflinks 3.416        
cufflinks 4.476        
cufflinks 4.502        
cufflinks 7.2        
cufflinks 5.59        
cufflinks 28.641     High High
cufflinks 0.872       Low
cufflinks 6.73        
cufflinks 7.377        
cufflinks 1.763        
cufflinks 6.873        
cufflinks 10.713       High
cufflinks 7.946        
cufflinks 6.418        
cufflinks 6.297        
cufflinks 0.481       Low
cufflinks 1.259       Low
cufflinks 1.607       Low
cufflinks 0.441       Low
cufflinks 6.873        
cufflinks 13.161     High High

0 Strain