Gene : Sobic.006G045200 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR24031:SF50 - DEAD/DEAH BOX RNA HELICASE FAMILY PROTEIN Genomic Order:  478
Name:  ? Sobic.006G045200 Secondary Identifier:  ? PAC:37947044
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G045200 0.5kb upstream 0.5kb upstream 9947 true Chr06: 31727227-31737173 Sorghum bicolor
Sobic.006G045200 0.5kb upstream 0.5kb upstream 500 false Chr06: 31727227-31727726 Sorghum bicolor
Sobic.006G045200 0.5kb downstream 0.5kb downstream 9947 true Chr06: 31727727-31737673 Sorghum bicolor
Sobic.006G045200 0.5kb downstream 0.5kb downstream 500 false Chr06: 31737174-31737673 Sorghum bicolor
Sobic.006G045200 1.0kb upstream 1.0kb upstream 10447 true Chr06: 31726727-31737173 Sorghum bicolor
Sobic.006G045200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 31726727-31727726 Sorghum bicolor
Sobic.006G045200 1.0kb downstream 1.0kb downstream 10447 true Chr06: 31727727-31738173 Sorghum bicolor
Sobic.006G045200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 31737174-31738173 Sorghum bicolor
Sobic.006G045200 2.0kb upstream 2.0kb upstream 11447 true Chr06: 31725727-31737173 Sorghum bicolor
Sobic.006G045200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 31725727-31727726 Sorghum bicolor
Sobic.006G045200 2.0kb downstream 2.0kb downstream 11447 true Chr06: 31727727-31739173 Sorghum bicolor
Sobic.006G045200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 31737174-31739173 Sorghum bicolor
Sobic.006G045200 5.0kb upstream 5.0kb upstream 14447 true Chr06: 31722727-31737173 Sorghum bicolor
Sobic.006G045200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 31722727-31727726 Sorghum bicolor
Sobic.006G045200 5.0kb downstream 5.0kb downstream 14447 true Chr06: 31727727-31742173 Sorghum bicolor
Sobic.006G045200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 31737174-31742173 Sorghum bicolor
Sobic.006G045200 10.0kb upstream 10.0kb upstream 19447 true Chr06: 31717727-31737173 Sorghum bicolor
Sobic.006G045200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 31717727-31727726 Sorghum bicolor
Sobic.006G045200 10.0kb downstream 10.0kb downstream 19447 true Chr06: 31727727-31747173 Sorghum bicolor
Sobic.006G045200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 31737174-31747173 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041472 5273 Angiosperm View MSA
122187069 5267 Panicoideae View MSA
124582136 5269 Grass View MSA
121349019 5274 Embryophyte View MSA
123425837 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.283       Low
cufflinks 0.21       Low
cufflinks 0.847        
cufflinks 0.867        
cufflinks 0.92        
cufflinks 0.947        
cufflinks 0.752        
cufflinks 0.43        
cufflinks 0.978       High
cufflinks 0.851        
cufflinks 0.467        
cufflinks 0.563        
cufflinks 0.649        
cufflinks 0.334        
cufflinks 0.92        
cufflinks 0.549        
cufflinks 0.71        
cufflinks 0.698        
cufflinks 0.64        
cufflinks 0.757        
cufflinks 2.199       High
cufflinks 0.322       Low
cufflinks 0.35        
cufflinks 0.338        
cufflinks 0.5        
cufflinks 0.243       Low
cufflinks 0.542        
cufflinks 0.171       Low
cufflinks 1.045       High
cufflinks 1.099       High

0 Strain