Gene : Sobic.006G044400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11802//PTHR11802:SF45 - SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE // SUBFAMILY NOT NAMED Genomic Order:  469
Name:  ? Sobic.006G044400 Secondary Identifier:  ? PAC:37949279
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G044400 0.5kb upstream 0.5kb upstream 11624 true Chr06: 30971365-30982988 Sorghum bicolor
Sobic.006G044400 0.5kb upstream 0.5kb upstream 500 false Chr06: 30982489-30982988 Sorghum bicolor
Sobic.006G044400 0.5kb downstream 0.5kb downstream 11624 true Chr06: 30970865-30982488 Sorghum bicolor
Sobic.006G044400 0.5kb downstream 0.5kb downstream 500 false Chr06: 30970865-30971364 Sorghum bicolor
Sobic.006G044400 1.0kb upstream 1.0kb upstream 12124 true Chr06: 30971365-30983488 Sorghum bicolor
Sobic.006G044400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 30982489-30983488 Sorghum bicolor
Sobic.006G044400 1.0kb downstream 1.0kb downstream 12124 true Chr06: 30970365-30982488 Sorghum bicolor
Sobic.006G044400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 30970365-30971364 Sorghum bicolor
Sobic.006G044400 2.0kb upstream 2.0kb upstream 13124 true Chr06: 30971365-30984488 Sorghum bicolor
Sobic.006G044400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 30982489-30984488 Sorghum bicolor
Sobic.006G044400 2.0kb downstream 2.0kb downstream 13124 true Chr06: 30969365-30982488 Sorghum bicolor
Sobic.006G044400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 30969365-30971364 Sorghum bicolor
Sobic.006G044400 5.0kb upstream 5.0kb upstream 16124 true Chr06: 30971365-30987488 Sorghum bicolor
Sobic.006G044400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 30982489-30987488 Sorghum bicolor
Sobic.006G044400 5.0kb downstream 5.0kb downstream 16124 true Chr06: 30966365-30982488 Sorghum bicolor
Sobic.006G044400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 30966365-30971364 Sorghum bicolor
Sobic.006G044400 10.0kb upstream 10.0kb upstream 21124 true Chr06: 30971365-30992488 Sorghum bicolor
Sobic.006G044400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 30982489-30992488 Sorghum bicolor
Sobic.006G044400 10.0kb downstream 10.0kb downstream 21124 true Chr06: 30961365-30982488 Sorghum bicolor
Sobic.006G044400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 30961365-30971364 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041261 5273 Angiosperm View MSA
122198502 5267 Panicoideae View MSA
124569305 5269 Grass View MSA
121344496 5274 Embryophyte View MSA
123428424 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.002     Low Low
cufflinks 1.211        
cufflinks 2.663        
cufflinks 3.392        
cufflinks 4.296        
cufflinks 2.666        
cufflinks 4.132        
cufflinks 4.266        
cufflinks 3.081        
cufflinks 2.837        
cufflinks 4.518        
cufflinks 6.529        
cufflinks 5.203        
cufflinks 5.9        
cufflinks 1.969        
cufflinks 3.303        
cufflinks 4.203        
cufflinks 4.608        
cufflinks 3.107        
cufflinks 4.992        
cufflinks 1.619        
cufflinks 3.352        
cufflinks 5.744        
cufflinks 5.371        
cufflinks 1.624        
cufflinks 1.355        
cufflinks 5.546        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 6.404        
cufflinks 1.575        

0 Strain