Gene : Sobic.006G047200 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR31945//PTHR31945:SF17 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR Genomic Order:  497
Name:  ? Sobic.006G047200 Secondary Identifier:  ? PAC:37947435
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G047200 0.5kb upstream 0.5kb upstream 2303 true Chr06: 32754421-32756723 Sorghum bicolor
Sobic.006G047200 0.5kb upstream 0.5kb upstream 500 false Chr06: 32756224-32756723 Sorghum bicolor
Sobic.006G047200 0.5kb downstream 0.5kb downstream 2303 true Chr06: 32753921-32756223 Sorghum bicolor
Sobic.006G047200 0.5kb downstream 0.5kb downstream 500 false Chr06: 32753921-32754420 Sorghum bicolor
Sobic.006G047200 1.0kb upstream 1.0kb upstream 2803 true Chr06: 32754421-32757223 Sorghum bicolor
Sobic.006G047200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 32756224-32757223 Sorghum bicolor
Sobic.006G047200 1.0kb downstream 1.0kb downstream 2803 true Chr06: 32753421-32756223 Sorghum bicolor
Sobic.006G047200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 32753421-32754420 Sorghum bicolor
Sobic.006G047200 2.0kb upstream 2.0kb upstream 3803 true Chr06: 32754421-32758223 Sorghum bicolor
Sobic.006G047200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 32756224-32758223 Sorghum bicolor
Sobic.006G047200 2.0kb downstream 2.0kb downstream 3803 true Chr06: 32752421-32756223 Sorghum bicolor
Sobic.006G047200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 32752421-32754420 Sorghum bicolor
Sobic.006G047200 5.0kb upstream 5.0kb upstream 6803 true Chr06: 32754421-32761223 Sorghum bicolor
Sobic.006G047200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 32756224-32761223 Sorghum bicolor
Sobic.006G047200 5.0kb downstream 5.0kb downstream 6803 true Chr06: 32749421-32756223 Sorghum bicolor
Sobic.006G047200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 32749421-32754420 Sorghum bicolor
Sobic.006G047200 10.0kb upstream 10.0kb upstream 11803 true Chr06: 32754421-32766223 Sorghum bicolor
Sobic.006G047200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 32756224-32766223 Sorghum bicolor
Sobic.006G047200 10.0kb downstream 10.0kb downstream 11803 true Chr06: 32744421-32756223 Sorghum bicolor
Sobic.006G047200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 32744421-32754420 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194671 5267 Panicoideae View MSA
124580428 5269 Grass View MSA
122047827 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low Low
cufflinks 0.01     Low  
cufflinks 0.009     Low Low
cufflinks 0.025     Low  
cufflinks 4.237       High
cufflinks 2.363       High
cufflinks 0.03     Low  
cufflinks 7.78       High
cufflinks 0.025     Low  
cufflinks 0.018     Low  
cufflinks 0.011     Low  
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.133       High
cufflinks 2.548       High
cufflinks 3.094       High
cufflinks 0.067        
cufflinks 0.022     Low  
cufflinks 0.975        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  
cufflinks 0.041     Low  

0 Strain