Gene : Sobic.006G048400 S. bicolor v3.1.1
Defline:  similar to Os04g0380200 protein Genomic Order:  509
Name:  ? Sobic.006G048400 Secondary Identifier:  ? PAC:37947192
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G048400 0.5kb upstream 0.5kb upstream 3101 true Chr06: 33980516-33983616 Sorghum bicolor
Sobic.006G048400 0.5kb upstream 0.5kb upstream 500 false Chr06: 33983117-33983616 Sorghum bicolor
Sobic.006G048400 0.5kb downstream 0.5kb downstream 3101 true Chr06: 33980016-33983116 Sorghum bicolor
Sobic.006G048400 0.5kb downstream 0.5kb downstream 500 false Chr06: 33980016-33980515 Sorghum bicolor
Sobic.006G048400 1.0kb upstream 1.0kb upstream 3601 true Chr06: 33980516-33984116 Sorghum bicolor
Sobic.006G048400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 33983117-33984116 Sorghum bicolor
Sobic.006G048400 1.0kb downstream 1.0kb downstream 3601 true Chr06: 33979516-33983116 Sorghum bicolor
Sobic.006G048400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 33979516-33980515 Sorghum bicolor
Sobic.006G048400 2.0kb upstream 2.0kb upstream 4601 true Chr06: 33980516-33985116 Sorghum bicolor
Sobic.006G048400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 33983117-33985116 Sorghum bicolor
Sobic.006G048400 2.0kb downstream 2.0kb downstream 4601 true Chr06: 33978516-33983116 Sorghum bicolor
Sobic.006G048400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 33978516-33980515 Sorghum bicolor
Sobic.006G048400 5.0kb upstream 5.0kb upstream 7601 true Chr06: 33980516-33988116 Sorghum bicolor
Sobic.006G048400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 33983117-33988116 Sorghum bicolor
Sobic.006G048400 5.0kb downstream 5.0kb downstream 7601 true Chr06: 33975516-33983116 Sorghum bicolor
Sobic.006G048400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 33975516-33980515 Sorghum bicolor
Sobic.006G048400 10.0kb upstream 10.0kb upstream 12601 true Chr06: 33980516-33993116 Sorghum bicolor
Sobic.006G048400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 33983117-33993116 Sorghum bicolor
Sobic.006G048400 10.0kb downstream 10.0kb downstream 12601 true Chr06: 33970516-33983116 Sorghum bicolor
Sobic.006G048400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 33970516-33980515 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186964 5267 Panicoideae View MSA
124588220 5269 Grass View MSA
122050080 5273 Angiosperm View MSA
121311726 5274 Embryophyte View MSA
123348985 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.105       Low
cufflinks 29.246     High High
cufflinks 20.175     High High
cufflinks 3.932        
cufflinks 0.878        
cufflinks 7.33        
cufflinks 13.024     High High
cufflinks 10.155     High High
cufflinks 0.187       Low
cufflinks 0.381       Low
cufflinks 1.783        
cufflinks 0.368       Low
cufflinks 2.397        
cufflinks 1.034        
cufflinks 1.866        
cufflinks 22.12     High High
cufflinks 8.396        
cufflinks 15.424     High High
cufflinks 11.506     High High
cufflinks 4.085        
cufflinks 0.159       Low
cufflinks 0.645        
cufflinks 0.779        
cufflinks 0.789        
cufflinks 17.921     High High
cufflinks 21.105     High High
cufflinks 1.187        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.516        
cufflinks 1.79        

0 Strain