Gene : Sobic.002G159300 S. bicolor v3.1.1
Defline:  (1 of 3) 4.99.1.1 - Ferrochelatase / Protoheme ferro-lyase Genomic Order:  1625
Name:  ? Sobic.002G159300 Secondary Identifier:  ? PAC:37954637
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor HEME-BIOSYNTHESIS-II Sorghum bicolor pathologic  
Sbicolor PWY-5918 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G159300 0.5kb upstream 0.5kb upstream 11120 true Chr02: 49268835-49279954 Sorghum bicolor
Sobic.002G159300 0.5kb upstream 0.5kb upstream 500 false Chr02: 49268835-49269334 Sorghum bicolor
Sobic.002G159300 0.5kb downstream 0.5kb downstream 11120 true Chr02: 49269335-49280454 Sorghum bicolor
Sobic.002G159300 0.5kb downstream 0.5kb downstream 500 false Chr02: 49279955-49280454 Sorghum bicolor
Sobic.002G159300 1.0kb upstream 1.0kb upstream 11620 true Chr02: 49268335-49279954 Sorghum bicolor
Sobic.002G159300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 49268335-49269334 Sorghum bicolor
Sobic.002G159300 1.0kb downstream 1.0kb downstream 11620 true Chr02: 49269335-49280954 Sorghum bicolor
Sobic.002G159300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 49279955-49280954 Sorghum bicolor
Sobic.002G159300 2.0kb upstream 2.0kb upstream 12620 true Chr02: 49267335-49279954 Sorghum bicolor
Sobic.002G159300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 49267335-49269334 Sorghum bicolor
Sobic.002G159300 2.0kb downstream 2.0kb downstream 12620 true Chr02: 49269335-49281954 Sorghum bicolor
Sobic.002G159300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 49279955-49281954 Sorghum bicolor
Sobic.002G159300 5.0kb upstream 5.0kb upstream 15620 true Chr02: 49264335-49279954 Sorghum bicolor
Sobic.002G159300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 49264335-49269334 Sorghum bicolor
Sobic.002G159300 5.0kb downstream 5.0kb downstream 15620 true Chr02: 49269335-49284954 Sorghum bicolor
Sobic.002G159300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 49279955-49284954 Sorghum bicolor
Sobic.002G159300 10.0kb upstream 10.0kb upstream 20620 true Chr02: 49259335-49279954 Sorghum bicolor
Sobic.002G159300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 49259335-49269334 Sorghum bicolor
Sobic.002G159300 10.0kb downstream 10.0kb downstream 20620 true Chr02: 49269335-49289954 Sorghum bicolor
Sobic.002G159300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 49279955-49289954 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183730 5267 Panicoideae View MSA
124577212 5269 Grass View MSA
122047545 5273 Angiosperm View MSA
121310756 5274 Embryophyte View MSA
123426598 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.761        
cufflinks 3.029        
cufflinks 6.887       High
cufflinks 9.618       High
cufflinks 1.668       Low
cufflinks 3.31        
cufflinks 3.053        
cufflinks 1.756       Low
cufflinks 5.724        
cufflinks 6.522        
cufflinks 6.86       High
cufflinks 5.729        
cufflinks 3.486        
cufflinks 4.455        
cufflinks 5.981        
cufflinks 5.762        
cufflinks 3.458        
cufflinks 3.175        
cufflinks 3.81        
cufflinks 6.313        
cufflinks 2.243       Low
cufflinks 4.817        
cufflinks 5.357        
cufflinks 4.748        
cufflinks 3.558        
cufflinks 2.014       Low
cufflinks 6.588        
cufflinks 5.838        
cufflinks 2.632        
cufflinks 4.83        

0 Strain