Gene : Sobic.006G054300 S. bicolor v3.1.1
Defline:  (1 of 1) 3.1.1.92 - 4-sulfomuconolactone hydrolase Genomic Order:  576
Name:  ? Sobic.006G054300 Secondary Identifier:  ? PAC:37949257
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.006G054300 0.5kb upstream 0.5kb upstream 4293 true Chr06: 39389151-39393443 Sorghum bicolor
Sobic.006G054300 0.5kb upstream 0.5kb upstream 500 false Chr06: 39389151-39389650 Sorghum bicolor
Sobic.006G054300 0.5kb downstream 0.5kb downstream 4293 true Chr06: 39389651-39393943 Sorghum bicolor
Sobic.006G054300 0.5kb downstream 0.5kb downstream 500 false Chr06: 39393444-39393943 Sorghum bicolor
Sobic.006G054300 1.0kb upstream 1.0kb upstream 4793 true Chr06: 39388651-39393443 Sorghum bicolor
Sobic.006G054300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 39388651-39389650 Sorghum bicolor
Sobic.006G054300 1.0kb downstream 1.0kb downstream 4793 true Chr06: 39389651-39394443 Sorghum bicolor
Sobic.006G054300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 39393444-39394443 Sorghum bicolor
Sobic.006G054300 2.0kb upstream 2.0kb upstream 5793 true Chr06: 39387651-39393443 Sorghum bicolor
Sobic.006G054300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 39387651-39389650 Sorghum bicolor
Sobic.006G054300 2.0kb downstream 2.0kb downstream 5793 true Chr06: 39389651-39395443 Sorghum bicolor
Sobic.006G054300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 39393444-39395443 Sorghum bicolor
Sobic.006G054300 5.0kb upstream 5.0kb upstream 8793 true Chr06: 39384651-39393443 Sorghum bicolor
Sobic.006G054300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 39384651-39389650 Sorghum bicolor
Sobic.006G054300 5.0kb downstream 5.0kb downstream 8793 true Chr06: 39389651-39398443 Sorghum bicolor
Sobic.006G054300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 39393444-39398443 Sorghum bicolor
Sobic.006G054300 10.0kb upstream 10.0kb upstream 13793 true Chr06: 39379651-39393443 Sorghum bicolor
Sobic.006G054300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 39379651-39389650 Sorghum bicolor
Sobic.006G054300 10.0kb downstream 10.0kb downstream 13793 true Chr06: 39389651-39403443 Sorghum bicolor
Sobic.006G054300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 39393444-39403443 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041304 5273 Angiosperm View MSA
122177647 5267 Panicoideae View MSA
124580772 5269 Grass View MSA
121344175 5274 Embryophyte View MSA
123425366 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.014       Low
cufflinks 17.337     High  
cufflinks 10.467     High  
cufflinks 4.065        
cufflinks 11.214        
cufflinks 7.549        
cufflinks 17.844     High  
cufflinks 28.098     High High
cufflinks 2.776        
cufflinks 3.692        
cufflinks 1.245       Low
cufflinks 1.155       Low
cufflinks 3.63        
cufflinks 1.42       Low
cufflinks 12.566     High  
cufflinks 12.761     High  
cufflinks 17.325     High  
cufflinks 21.233     High High
cufflinks 13.637     High  
cufflinks 17.976     High  
cufflinks 15.036     High  
cufflinks 3.283        
cufflinks 1.699       Low
cufflinks 2.013        
cufflinks 19.957     High High
cufflinks 18.071     High  
cufflinks 0.705       Low
cufflinks 0.149       Low
cufflinks 33.451     High High
cufflinks 11.698        

0 Strain