Gene : Sobic.002G151800 S. bicolor v3.1.1
Defline:  (1 of 3) PTHR11452//PTHR11452:SF32 - ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE // SUBFAMILY NOT NAMED Genomic Order:  1548
Name:  ? Sobic.002G151800 Secondary Identifier:  ? PAC:37952617
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY0-1301 Sorghum bicolor pathologic  
Sbicolor PWY-6527 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G151800 0.5kb upstream 0.5kb upstream 9768 true Chr02: 45365889-45375656 Sorghum bicolor
Sobic.002G151800 0.5kb upstream 0.5kb upstream 500 false Chr02: 45365889-45366388 Sorghum bicolor
Sobic.002G151800 0.5kb downstream 0.5kb downstream 9768 true Chr02: 45366389-45376156 Sorghum bicolor
Sobic.002G151800 0.5kb downstream 0.5kb downstream 500 false Chr02: 45375657-45376156 Sorghum bicolor
Sobic.002G151800 1.0kb upstream 1.0kb upstream 10268 true Chr02: 45365389-45375656 Sorghum bicolor
Sobic.002G151800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 45365389-45366388 Sorghum bicolor
Sobic.002G151800 1.0kb downstream 1.0kb downstream 10268 true Chr02: 45366389-45376656 Sorghum bicolor
Sobic.002G151800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 45375657-45376656 Sorghum bicolor
Sobic.002G151800 2.0kb upstream 2.0kb upstream 11268 true Chr02: 45364389-45375656 Sorghum bicolor
Sobic.002G151800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 45364389-45366388 Sorghum bicolor
Sobic.002G151800 2.0kb downstream 2.0kb downstream 11268 true Chr02: 45366389-45377656 Sorghum bicolor
Sobic.002G151800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 45375657-45377656 Sorghum bicolor
Sobic.002G151800 5.0kb upstream 5.0kb upstream 14268 true Chr02: 45361389-45375656 Sorghum bicolor
Sobic.002G151800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 45361389-45366388 Sorghum bicolor
Sobic.002G151800 5.0kb downstream 5.0kb downstream 14268 true Chr02: 45366389-45380656 Sorghum bicolor
Sobic.002G151800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 45375657-45380656 Sorghum bicolor
Sobic.002G151800 10.0kb upstream 10.0kb upstream 19268 true Chr02: 45356389-45375656 Sorghum bicolor
Sobic.002G151800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 45356389-45366388 Sorghum bicolor
Sobic.002G151800 10.0kb downstream 10.0kb downstream 19268 true Chr02: 45366389-45385656 Sorghum bicolor
Sobic.002G151800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 45375657-45385656 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192526 5267 Panicoideae View MSA
124466351 5269 Grass View MSA
122048958 5273 Angiosperm View MSA
121347217 5274 Embryophyte View MSA
123428348 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.002     Low  
cufflinks 0.001     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.201        
cufflinks 0.856       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.498       High
cufflinks 0.014     Low  
cufflinks 0.005     Low  
cufflinks 0.002     Low  
cufflinks 0.002     Low  
cufflinks 0.009     Low  
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.914       High
cufflinks 0.341       High
cufflinks 0.23        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low Low
cufflinks 2.493       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.1        

0 Strain