Gene : Sobic.002G151700 S. bicolor v3.1.1
Defline:  (1 of 3) PTHR11452//PTHR11452:SF32 - ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE // SUBFAMILY NOT NAMED Genomic Order:  1547
Name:  ? Sobic.002G151700 Secondary Identifier:  ? PAC:37954199
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY0-1301 Sorghum bicolor pathologic  
Sbicolor PWY-6527 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G151700 0.5kb upstream 0.5kb upstream 4718 true Chr02: 45285879-45290596 Sorghum bicolor
Sobic.002G151700 0.5kb upstream 0.5kb upstream 500 false Chr02: 45285879-45286378 Sorghum bicolor
Sobic.002G151700 0.5kb downstream 0.5kb downstream 4718 true Chr02: 45286379-45291096 Sorghum bicolor
Sobic.002G151700 0.5kb downstream 0.5kb downstream 500 false Chr02: 45290597-45291096 Sorghum bicolor
Sobic.002G151700 1.0kb upstream 1.0kb upstream 5218 true Chr02: 45285379-45290596 Sorghum bicolor
Sobic.002G151700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 45285379-45286378 Sorghum bicolor
Sobic.002G151700 1.0kb downstream 1.0kb downstream 5218 true Chr02: 45286379-45291596 Sorghum bicolor
Sobic.002G151700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 45290597-45291596 Sorghum bicolor
Sobic.002G151700 2.0kb upstream 2.0kb upstream 6218 true Chr02: 45284379-45290596 Sorghum bicolor
Sobic.002G151700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 45284379-45286378 Sorghum bicolor
Sobic.002G151700 2.0kb downstream 2.0kb downstream 6218 true Chr02: 45286379-45292596 Sorghum bicolor
Sobic.002G151700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 45290597-45292596 Sorghum bicolor
Sobic.002G151700 5.0kb upstream 5.0kb upstream 9218 true Chr02: 45281379-45290596 Sorghum bicolor
Sobic.002G151700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 45281379-45286378 Sorghum bicolor
Sobic.002G151700 5.0kb downstream 5.0kb downstream 9218 true Chr02: 45286379-45295596 Sorghum bicolor
Sobic.002G151700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 45290597-45295596 Sorghum bicolor
Sobic.002G151700 10.0kb upstream 10.0kb upstream 14218 true Chr02: 45276379-45290596 Sorghum bicolor
Sobic.002G151700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 45276379-45286378 Sorghum bicolor
Sobic.002G151700 10.0kb downstream 10.0kb downstream 14218 true Chr02: 45286379-45300596 Sorghum bicolor
Sobic.002G151700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 45290597-45300596 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192526 5267 Panicoideae View MSA
124466351 5269 Grass View MSA
122048958 5273 Angiosperm View MSA
121347217 5274 Embryophyte View MSA
123428348 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.327        

0 Strain