Gene : Sobic.002G286700 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR33734:SF5 - LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 Genomic Order:  2939
Name:  ? Sobic.002G286700 Secondary Identifier:  ? PAC:37954371
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G286700 0.5kb upstream 0.5kb upstream 3302 true Chr02: 66641686-66644987 Sorghum bicolor
Sobic.002G286700 0.5kb upstream 0.5kb upstream 500 false Chr02: 66641686-66642185 Sorghum bicolor
Sobic.002G286700 0.5kb downstream 0.5kb downstream 3302 true Chr02: 66642186-66645487 Sorghum bicolor
Sobic.002G286700 0.5kb downstream 0.5kb downstream 500 false Chr02: 66644988-66645487 Sorghum bicolor
Sobic.002G286700 1.0kb upstream 1.0kb upstream 3802 true Chr02: 66641186-66644987 Sorghum bicolor
Sobic.002G286700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 66641186-66642185 Sorghum bicolor
Sobic.002G286700 1.0kb downstream 1.0kb downstream 3802 true Chr02: 66642186-66645987 Sorghum bicolor
Sobic.002G286700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 66644988-66645987 Sorghum bicolor
Sobic.002G286700 2.0kb upstream 2.0kb upstream 4802 true Chr02: 66640186-66644987 Sorghum bicolor
Sobic.002G286700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 66640186-66642185 Sorghum bicolor
Sobic.002G286700 2.0kb downstream 2.0kb downstream 4802 true Chr02: 66642186-66646987 Sorghum bicolor
Sobic.002G286700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 66644988-66646987 Sorghum bicolor
Sobic.002G286700 5.0kb upstream 5.0kb upstream 7802 true Chr02: 66637186-66644987 Sorghum bicolor
Sobic.002G286700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 66637186-66642185 Sorghum bicolor
Sobic.002G286700 5.0kb downstream 5.0kb downstream 7802 true Chr02: 66642186-66649987 Sorghum bicolor
Sobic.002G286700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 66644988-66649987 Sorghum bicolor
Sobic.002G286700 10.0kb upstream 10.0kb upstream 12802 true Chr02: 66632186-66644987 Sorghum bicolor
Sobic.002G286700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 66632186-66642185 Sorghum bicolor
Sobic.002G286700 10.0kb downstream 10.0kb downstream 12802 true Chr02: 66642186-66654987 Sorghum bicolor
Sobic.002G286700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 66644988-66654987 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041196 5273 Angiosperm View MSA
122196804 5267 Panicoideae View MSA
124571342 5269 Grass View MSA
121350262 5274 Embryophyte View MSA
123381651 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.546        
cufflinks 0.01     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 7.892        
cufflinks 0.006     Low Low
cufflinks 5.633        
cufflinks 0.249        
cufflinks 0.137        
cufflinks 0.727        
cufflinks 4.024        
cufflinks 1.954        
cufflinks 0.251        
cufflinks 2.212        
cufflinks 0.852        
cufflinks 0.011     Low Low
cufflinks 5.505        
cufflinks 5.425        
cufflinks 0.008     Low Low
cufflinks 4.176        
cufflinks 14.165     High High
cufflinks 4.179        
cufflinks 2.386        
cufflinks 3.643        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low Low
cufflinks 0.481        
cufflinks 0.763        
cufflinks 1.881        
cufflinks 1.245        

0 Strain