Gene : Sobic.002G284100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR33101:SF6 - ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 Genomic Order:  2911
Name:  ? Sobic.002G284100 Secondary Identifier:  ? PAC:37955378
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G284100 0.5kb upstream 0.5kb upstream 4272 true Chr02: 66489622-66493893 Sorghum bicolor
Sobic.002G284100 0.5kb upstream 0.5kb upstream 500 false Chr02: 66493394-66493893 Sorghum bicolor
Sobic.002G284100 0.5kb downstream 0.5kb downstream 4272 true Chr02: 66489122-66493393 Sorghum bicolor
Sobic.002G284100 0.5kb downstream 0.5kb downstream 500 false Chr02: 66489122-66489621 Sorghum bicolor
Sobic.002G284100 1.0kb upstream 1.0kb upstream 4772 true Chr02: 66489622-66494393 Sorghum bicolor
Sobic.002G284100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 66493394-66494393 Sorghum bicolor
Sobic.002G284100 1.0kb downstream 1.0kb downstream 4772 true Chr02: 66488622-66493393 Sorghum bicolor
Sobic.002G284100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 66488622-66489621 Sorghum bicolor
Sobic.002G284100 2.0kb upstream 2.0kb upstream 5772 true Chr02: 66489622-66495393 Sorghum bicolor
Sobic.002G284100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 66493394-66495393 Sorghum bicolor
Sobic.002G284100 2.0kb downstream 2.0kb downstream 5772 true Chr02: 66487622-66493393 Sorghum bicolor
Sobic.002G284100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 66487622-66489621 Sorghum bicolor
Sobic.002G284100 5.0kb upstream 5.0kb upstream 8772 true Chr02: 66489622-66498393 Sorghum bicolor
Sobic.002G284100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 66493394-66498393 Sorghum bicolor
Sobic.002G284100 5.0kb downstream 5.0kb downstream 8772 true Chr02: 66484622-66493393 Sorghum bicolor
Sobic.002G284100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 66484622-66489621 Sorghum bicolor
Sobic.002G284100 10.0kb upstream 10.0kb upstream 13772 true Chr02: 66489622-66503393 Sorghum bicolor
Sobic.002G284100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 66493394-66503393 Sorghum bicolor
Sobic.002G284100 10.0kb downstream 10.0kb downstream 13772 true Chr02: 66479622-66493393 Sorghum bicolor
Sobic.002G284100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 66479622-66489621 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176024 5267 Panicoideae View MSA
124573017 5269 Grass View MSA
122042177 5273 Angiosperm View MSA
121349126 5274 Embryophyte View MSA
123381182 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.697        
cufflinks 0.233       Low
cufflinks 0.098       Low
cufflinks 0.25       Low
cufflinks 28.127     High High
cufflinks 1.104        
cufflinks 11.647     High  
cufflinks 2.235        
cufflinks 2.615        
cufflinks 3.523        
cufflinks 8.491        
cufflinks 8.612        
cufflinks 8.717        
cufflinks 9.92        
cufflinks 10.083        
cufflinks 0.117       Low
cufflinks 10.579        
cufflinks 11.486     High  
cufflinks 0.75       Low
cufflinks 8.603        
cufflinks 26.57     High High
cufflinks 10.693        
cufflinks 9.322        
cufflinks 9.635        
cufflinks 0.205       Low
cufflinks 0.289       Low
cufflinks 5.54        
cufflinks 1.989        
cufflinks 11.803     High  
cufflinks 19.848     High  

0 Strain