Gene : Sobic.002G277200 S. bicolor v3.1.1
Defline:  (1 of 1) K14773 - U3 small nucleolar RNA-associated protein 23 (UTP23) Genomic Order:  2839
Name:  ? Sobic.002G277200 Secondary Identifier:  ? PAC:37950693
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G277200 0.5kb upstream 0.5kb upstream 3061 true Chr02: 65977566-65980626 Sorghum bicolor
Sobic.002G277200 0.5kb upstream 0.5kb upstream 500 false Chr02: 65980127-65980626 Sorghum bicolor
Sobic.002G277200 0.5kb downstream 0.5kb downstream 3061 true Chr02: 65977066-65980126 Sorghum bicolor
Sobic.002G277200 0.5kb downstream 0.5kb downstream 500 false Chr02: 65977066-65977565 Sorghum bicolor
Sobic.002G277200 1.0kb upstream 1.0kb upstream 3561 true Chr02: 65977566-65981126 Sorghum bicolor
Sobic.002G277200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 65980127-65981126 Sorghum bicolor
Sobic.002G277200 1.0kb downstream 1.0kb downstream 3561 true Chr02: 65976566-65980126 Sorghum bicolor
Sobic.002G277200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 65976566-65977565 Sorghum bicolor
Sobic.002G277200 2.0kb upstream 2.0kb upstream 4561 true Chr02: 65977566-65982126 Sorghum bicolor
Sobic.002G277200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 65980127-65982126 Sorghum bicolor
Sobic.002G277200 2.0kb downstream 2.0kb downstream 4561 true Chr02: 65975566-65980126 Sorghum bicolor
Sobic.002G277200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 65975566-65977565 Sorghum bicolor
Sobic.002G277200 5.0kb upstream 5.0kb upstream 7561 true Chr02: 65977566-65985126 Sorghum bicolor
Sobic.002G277200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 65980127-65985126 Sorghum bicolor
Sobic.002G277200 5.0kb downstream 5.0kb downstream 7561 true Chr02: 65972566-65980126 Sorghum bicolor
Sobic.002G277200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 65972566-65977565 Sorghum bicolor
Sobic.002G277200 10.0kb upstream 10.0kb upstream 12561 true Chr02: 65977566-65990126 Sorghum bicolor
Sobic.002G277200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 65980127-65990126 Sorghum bicolor
Sobic.002G277200 10.0kb downstream 10.0kb downstream 12561 true Chr02: 65967566-65980126 Sorghum bicolor
Sobic.002G277200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 65967566-65977565 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176660 5267 Panicoideae View MSA
124580438 5269 Grass View MSA
122042240 5273 Angiosperm View MSA
121350234 5274 Embryophyte View MSA
123426184 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.713     High High
cufflinks 0.873       Low
cufflinks 2.14        
cufflinks 5.038        
cufflinks 4.453        
cufflinks 5.394        
cufflinks 1.883        
cufflinks 0.811       Low
cufflinks 5.149        
cufflinks 5.905        
cufflinks 3.53        
cufflinks 3.325        
cufflinks 3.626        
cufflinks 4.403        
cufflinks 4.673        
cufflinks 1.816        
cufflinks 2.306        
cufflinks 2.103        
cufflinks 2.077        
cufflinks 2.998        
cufflinks 10.239       High
cufflinks 4.485        
cufflinks 4.341        
cufflinks 4.225        
cufflinks 1.156       Low
cufflinks 0.707       Low
cufflinks 3.376        
cufflinks 9.106       High
cufflinks 1.703       Low
cufflinks 6.857       High

0 Strain