Gene : Sobic.002G273100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR34550//PTHR34550:SF2 - FAMILY NOT NAMED // 30S RIBOSOMAL PROTEIN S31, MITOCHONDRIAL Genomic Order:  2798
Name:  ? Sobic.002G273100 Secondary Identifier:  ? PAC:37951733
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G273100 0.5kb upstream 0.5kb upstream 3982 true Chr02: 65628720-65632701 Sorghum bicolor
Sobic.002G273100 0.5kb upstream 0.5kb upstream 500 false Chr02: 65632202-65632701 Sorghum bicolor
Sobic.002G273100 0.5kb downstream 0.5kb downstream 3982 true Chr02: 65628220-65632201 Sorghum bicolor
Sobic.002G273100 0.5kb downstream 0.5kb downstream 500 false Chr02: 65628220-65628719 Sorghum bicolor
Sobic.002G273100 1.0kb upstream 1.0kb upstream 4482 true Chr02: 65628720-65633201 Sorghum bicolor
Sobic.002G273100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 65632202-65633201 Sorghum bicolor
Sobic.002G273100 1.0kb downstream 1.0kb downstream 4482 true Chr02: 65627720-65632201 Sorghum bicolor
Sobic.002G273100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 65627720-65628719 Sorghum bicolor
Sobic.002G273100 2.0kb upstream 2.0kb upstream 5482 true Chr02: 65628720-65634201 Sorghum bicolor
Sobic.002G273100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 65632202-65634201 Sorghum bicolor
Sobic.002G273100 2.0kb downstream 2.0kb downstream 5482 true Chr02: 65626720-65632201 Sorghum bicolor
Sobic.002G273100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 65626720-65628719 Sorghum bicolor
Sobic.002G273100 5.0kb upstream 5.0kb upstream 8482 true Chr02: 65628720-65637201 Sorghum bicolor
Sobic.002G273100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 65632202-65637201 Sorghum bicolor
Sobic.002G273100 5.0kb downstream 5.0kb downstream 8482 true Chr02: 65623720-65632201 Sorghum bicolor
Sobic.002G273100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 65623720-65628719 Sorghum bicolor
Sobic.002G273100 10.0kb upstream 10.0kb upstream 13482 true Chr02: 65628720-65642201 Sorghum bicolor
Sobic.002G273100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 65632202-65642201 Sorghum bicolor
Sobic.002G273100 10.0kb downstream 10.0kb downstream 13482 true Chr02: 65618720-65632201 Sorghum bicolor
Sobic.002G273100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 65618720-65628719 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186432 5267 Panicoideae View MSA
124569985 5269 Grass View MSA
122046754 5273 Angiosperm View MSA
121345882 5274 Embryophyte View MSA
123380282 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.535       High
cufflinks 0.235       Low
cufflinks 0.591        
cufflinks 1.209        
cufflinks 0.949        
cufflinks 1.634       High
cufflinks 0.867        
cufflinks 0.363       Low
cufflinks 0.811        
cufflinks 0.749        
cufflinks 1.011        
cufflinks 1.082        
cufflinks 0.459       Low
cufflinks 1.062        
cufflinks 0.671        
cufflinks 0.63        
cufflinks 0.914        
cufflinks 0.788        
cufflinks 0.79        
cufflinks 0.926        
cufflinks 1.197        
cufflinks 1.751       High
cufflinks 0.84        
cufflinks 1.084        
cufflinks 0.591        
cufflinks 0.213       Low
cufflinks 0.858        
cufflinks 2.67       High
cufflinks 0.7        
cufflinks 0.841        

0 Strain