Gene : Sobic.002G272800 S. bicolor v3.1.1
Defline:  (1 of 1) K15151 - mediator of RNA polymerase II transcription subunit 10 (MED10, NUT2) Genomic Order:  2795
Name:  ? Sobic.002G272800 Secondary Identifier:  ? PAC:37950635
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.002G272800 0.5kb upstream 0.5kb upstream 7139 true Chr02: 65605172-65612310 Sorghum bicolor
Sobic.002G272800 0.5kb upstream 0.5kb upstream 500 false Chr02: 65605172-65605671 Sorghum bicolor
Sobic.002G272800 0.5kb downstream 0.5kb downstream 7139 true Chr02: 65605672-65612810 Sorghum bicolor
Sobic.002G272800 0.5kb downstream 0.5kb downstream 500 false Chr02: 65612311-65612810 Sorghum bicolor
Sobic.002G272800 1.0kb upstream 1.0kb upstream 7639 true Chr02: 65604672-65612310 Sorghum bicolor
Sobic.002G272800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 65604672-65605671 Sorghum bicolor
Sobic.002G272800 1.0kb downstream 1.0kb downstream 7639 true Chr02: 65605672-65613310 Sorghum bicolor
Sobic.002G272800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 65612311-65613310 Sorghum bicolor
Sobic.002G272800 2.0kb upstream 2.0kb upstream 8639 true Chr02: 65603672-65612310 Sorghum bicolor
Sobic.002G272800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 65603672-65605671 Sorghum bicolor
Sobic.002G272800 2.0kb downstream 2.0kb downstream 8639 true Chr02: 65605672-65614310 Sorghum bicolor
Sobic.002G272800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 65612311-65614310 Sorghum bicolor
Sobic.002G272800 5.0kb upstream 5.0kb upstream 11639 true Chr02: 65600672-65612310 Sorghum bicolor
Sobic.002G272800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 65600672-65605671 Sorghum bicolor
Sobic.002G272800 5.0kb downstream 5.0kb downstream 11639 true Chr02: 65605672-65617310 Sorghum bicolor
Sobic.002G272800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 65612311-65617310 Sorghum bicolor
Sobic.002G272800 10.0kb upstream 10.0kb upstream 16639 true Chr02: 65595672-65612310 Sorghum bicolor
Sobic.002G272800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 65595672-65605671 Sorghum bicolor
Sobic.002G272800 10.0kb downstream 10.0kb downstream 16639 true Chr02: 65605672-65622310 Sorghum bicolor
Sobic.002G272800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 65612311-65622310 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189613 5267 Panicoideae View MSA
124571000 5269 Grass View MSA
122043326 5273 Angiosperm View MSA
121345853 5274 Embryophyte View MSA
123425675 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.382       High
cufflinks 0.509       Low
cufflinks 0.866        
cufflinks 1.553        
cufflinks 1.012        
cufflinks 1.79       High
cufflinks 0.899        
cufflinks 0.784        
cufflinks 1.398        
cufflinks 1.237        
cufflinks 0.94        
cufflinks 1.062        
cufflinks 1.097        
cufflinks 1.083        
cufflinks 1.208        
cufflinks 1.027        
cufflinks 1.05        
cufflinks 0.987        
cufflinks 0.766        
cufflinks 1.261        
cufflinks 1.025        
cufflinks 1.253        
cufflinks 0.917        
cufflinks 0.96        
cufflinks 0.858        
cufflinks 0.486       Low
cufflinks 1.105        
cufflinks 6.202       High
cufflinks 0.821        
cufflinks 1.43        

0 Strain